Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RC38_RS05080 | Genome accession | NZ_CP010490 |
| Coordinates | 963645..963947 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC532 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 958645..968947
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC38_RS05055 (RC38_05055) | rpsR | 959007..959267 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RC38_RS05060 (RC38_05060) | lon | 959328..961703 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RC38_RS05065 (RC38_05065) | - | 961720..962367 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RC38_RS05070 (RC38_05070) | fliW | 962528..962917 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RC38_RS05075 (RC38_05075) | proC | 962917..963648 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RC38_RS05080 (RC38_05080) | ctsT | 963645..963947 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RC38_RS05085 (RC38_05085) | - | 963944..964606 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| RC38_RS05090 (RC38_05090) | - | 964603..965055 (+) | 453 | WP_059119519.1 | hypothetical protein | - |
| RC38_RS05095 (RC38_05095) | hemD | 965052..965681 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RC38_RS05100 (RC38_05100) | thiE | 965659..966291 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RC38_RS05105 (RC38_05105) | thiD | 966281..967093 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RC38_RS05110 (RC38_05110) | - | 967090..967776 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| RC38_RS05115 (RC38_05115) | - | 967773..968534 (-) | 762 | WP_002932753.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=138279 RC38_RS05080 WP_002932767.1 963645..963947(+) (ctsT) [Campylobacter jejuni strain CJ677CC532]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=138279 RC38_RS05080 WP_002932767.1 963645..963947(+) (ctsT) [Campylobacter jejuni strain CJ677CC532]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |