Detailed information NTG0138278

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: RC38_RS05075
• Genome accession: NZ_CP010490
• Coordinates: 962917..963648 (+)
• Length: 243 a.a.
• NCBI ID: WP_002932769.1
• Uniprot ID: A0A5T0Q210
• Organism: Campylobacter jejuni strain CJ677CC532
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 957917..968648

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RC38_RS05045 (RC38_05045)	rpsF	958059..958436 (+)	378	WP_002812868.1	30S ribosomal protein S6	-
RC38_RS05050 (RC38_05050)	ssb	958445..958996 (+)	552	WP_002932771.1	single-stranded DNA-binding protein	-
RC38_RS05055 (RC38_05055)	rpsR	959007..959267 (+)	261	WP_002853032.1	30S ribosomal protein S18	-
RC38_RS05060 (RC38_05060)	lon	959328..961703 (-)	2376	WP_002866098.1	endopeptidase La	-
RC38_RS05065 (RC38_05065)	-	961720..962367 (-)	648	WP_002877748.1	outer membrane protein assembly factor BamD	-
RC38_RS05070 (RC38_05070)	fliW	962528..962917 (+)	390	WP_002852982.1	flagellar assembly protein FliW	-
RC38_RS05075 (RC38_05075)	proC	962917..963648 (+)	732	WP_002932769.1	pyrroline-5-carboxylate reductase	Machinery gene
RC38_RS05080 (RC38_05080)	ctsT	963645..963947 (+)	303	WP_002932767.1	transformation system protein	Machinery gene
RC38_RS05085 (RC38_05085)	-	963944..964606 (+)	663	WP_002866103.1	hypothetical protein	-
RC38_RS05090 (RC38_05090)	-	964603..965055 (+)	453	WP_059119519.1	hypothetical protein	-
RC38_RS05095 (RC38_05095)	hemD	965052..965681 (-)	630	WP_002932761.1	uroporphyrinogen-III synthase	-
RC38_RS05100 (RC38_05100)	thiE	965659..966291 (-)	633	WP_002932757.1	thiamine phosphate synthase	-
RC38_RS05105 (RC38_05105)	thiD	966281..967093 (-)	813	WP_002869047.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
RC38_RS05110 (RC38_05110)	-	967090..967776 (-)	687	WP_002932755.1	3-methyladenine DNA glycosylase	-
RC38_RS05115 (RC38_05115)	-	967773..968534 (-)	762	WP_002932753.1	ATP-binding protein	-

Sequence

Protein

• Length: 243 a.a.
• Molecular weight: 26602.04 Da
• Isoelectric Point: 8.9105

>NTDB_id=138278 RC38_RS05075 WP_002932769.1 962917..963648(+) (proC) [Campylobacter jejuni strain CJ677CC532]
MLYILANGAMATALAYGLKDDYEICIVGRSIEKLQALTKEGFKTLLYKDFNIEGKDVILAFKPYALENIAQILKGRARIL
ISVLANVDFEKLQTIKAQNYVRIMPNTAAKYKASTTPYILKNSHFENEILDILKTFGSAYKLDNEIQMNAAMAISGCAPA
FLALIAESIANAGVYEGLSKELSLNLTRSLFKSSSALLEHEHPAIIKENICSPGGVTIKGIKILEQKGIRGSFFEAINAS
SAK

Nucleotide

• Length: 732 bp

>NTDB_id=138278 RC38_RS05075 WP_002932769.1 962917..963648(+) (proC) [Campylobacter jejuni strain CJ677CC532]
ATGCTCTATATACTTGCAAATGGAGCTATGGCAACAGCCTTAGCCTATGGATTAAAAGATGATTATGAAATTTGTATAGT
AGGAAGAAGTATAGAAAAACTTCAAGCCCTCACCAAAGAAGGCTTTAAAACCTTACTTTACAAAGATTTTAACATAGAAG
GTAAAGATGTTATTTTGGCTTTCAAACCTTATGCTTTAGAAAATATTGCCCAAATACTAAAAGGACGAGCACGCATCTTA
ATCTCTGTTTTAGCCAATGTTGATTTTGAAAAACTACAAACCATCAAAGCTCAAAATTATGTTAGAATAATGCCTAATAC
AGCAGCTAAATATAAGGCTTCAACTACACCATATATACTTAAAAACTCTCATTTTGAAAATGAAATTTTAGACATTTTAA
AAACTTTTGGTTCAGCTTATAAATTAGATAATGAAATACAAATGAATGCAGCTATGGCGATTAGCGGCTGCGCTCCTGCT
TTTTTAGCACTTATAGCAGAAAGTATTGCTAATGCTGGAGTTTATGAAGGTTTGTCAAAAGAACTTAGTCTCAATCTTAC
GCGCTCTTTATTTAAAAGCTCTAGTGCTTTACTAGAACATGAACATCCAGCTATTATCAAAGAAAATATTTGCTCCCCTG
GCGGAGTTACAATAAAAGGCATAAAAATACTCGAACAAAAAGGAATTCGCGGAAGTTTTTTTGAAGCCATAAATGCTAGC
AGCGCTAAATGA

Domains

Predicted by InterproScan.

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (4-85)

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (145-242)

3D structure

• AlphaFold DB: A0A5T0Q210

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	98.354	100	0.984