Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RC23_RS05140 | Genome accession | NZ_CP010486 |
| Coordinates | 968810..969112 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC095 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 963810..974112
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC23_RS05115 (RC23_05120) | rpsR | 964172..964432 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RC23_RS05120 (RC23_05125) | lon | 964493..966868 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RC23_RS05125 (RC23_05130) | - | 966885..967532 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RC23_RS05130 (RC23_05135) | fliW | 967693..968082 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RC23_RS05135 (RC23_05140) | proC | 968082..968813 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RC23_RS05140 (RC23_05145) | ctsT | 968810..969112 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RC23_RS05145 (RC23_05150) | - | 969109..969771 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| RC23_RS05150 (RC23_05155) | - | 969768..970220 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| RC23_RS05155 (RC23_05160) | hemD | 970217..970846 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RC23_RS05160 (RC23_05165) | thiE | 970824..971456 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RC23_RS05165 (RC23_05170) | thiD | 971446..972258 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RC23_RS05170 (RC23_05175) | - | 972255..972941 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| RC23_RS05175 (RC23_05180) | - | 972938..973699 (-) | 762 | WP_002932753.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=138174 RC23_RS05140 WP_002932767.1 968810..969112(+) (ctsT) [Campylobacter jejuni strain CJ677CC095]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=138174 RC23_RS05140 WP_002932767.1 968810..969112(+) (ctsT) [Campylobacter jejuni strain CJ677CC095]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |