Detailed information
Bioinformatically predicted
Overview
| Name | CJE0566 | Type | Regulator |
| Locus tag | RC27_RS08710 | Genome accession | NZ_CP010476 |
| Coordinates | 1635041..1635694 (-) | Length | 217 a.a. |
| NCBI ID | WP_059111151.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain CJ677CC521 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1621991..1651274 | 1635041..1635694 | within | 0 |
Gene organization within MGE regions
Location: 1621991..1651274
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC27_RS08590 (RC27_08570) | - | 1621991..1623193 (+) | 1203 | WP_052844203.1 | site-specific integrase | - |
| RC27_RS08595 (RC27_08575) | - | 1623190..1623360 (-) | 171 | WP_002864902.1 | helix-turn-helix domain-containing protein | - |
| RC27_RS08600 (RC27_08580) | - | 1623353..1623895 (-) | 543 | WP_059111110.1 | pentapeptide repeat-containing protein | - |
| RC27_RS08605 (RC27_08585) | - | 1623883..1624083 (-) | 201 | WP_059111111.1 | hypothetical protein | - |
| RC27_RS08610 (RC27_08590) | - | 1624124..1624543 (-) | 420 | WP_059111112.1 | YopX family protein | - |
| RC27_RS08615 (RC27_08595) | - | 1624547..1625245 (-) | 699 | WP_059111113.1 | antA/AntB antirepressor family protein | - |
| RC27_RS08620 (RC27_08600) | - | 1625419..1625814 (-) | 396 | WP_059111114.1 | hypothetical protein | - |
| RC27_RS08625 (RC27_08605) | - | 1625827..1626099 (-) | 273 | WP_059111115.1 | hypothetical protein | - |
| RC27_RS08630 (RC27_08610) | - | 1626092..1626415 (-) | 324 | WP_059111116.1 | hypothetical protein | - |
| RC27_RS08635 (RC27_08615) | - | 1626479..1627378 (-) | 900 | WP_171831519.1 | hypothetical protein | - |
| RC27_RS08640 (RC27_08620) | - | 1627412..1628164 (-) | 753 | WP_059111117.1 | site-specific DNA-methyltransferase | - |
| RC27_RS08645 (RC27_08625) | - | 1628166..1628423 (-) | 258 | WP_059111150.1 | hypothetical protein | - |
| RC27_RS08650 (RC27_08630) | - | 1628404..1629102 (-) | 699 | WP_059111118.1 | hypothetical protein | - |
| RC27_RS08655 (RC27_08635) | - | 1629102..1629836 (-) | 735 | WP_059111119.1 | hypothetical protein | - |
| RC27_RS08660 (RC27_08640) | - | 1629838..1630692 (-) | 855 | WP_048818565.1 | lambda-exonuclease family protein | - |
| RC27_RS08665 (RC27_08645) | - | 1630682..1631425 (-) | 744 | WP_048818566.1 | phage regulatory protein/antirepressor Ant | - |
| RC27_RS08670 (RC27_08650) | - | 1631422..1631604 (-) | 183 | WP_002900944.1 | hypothetical protein | - |
| RC27_RS08675 (RC27_08655) | - | 1631749..1631964 (+) | 216 | WP_048818567.1 | hypothetical protein | - |
| RC27_RS09325 | - | 1631934..1632098 (-) | 165 | WP_194717242.1 | hypothetical protein | - |
| RC27_RS08680 (RC27_08660) | - | 1632095..1632349 (-) | 255 | WP_048818568.1 | hypothetical protein | - |
| RC27_RS08685 (RC27_08665) | - | 1632340..1632609 (-) | 270 | WP_002783984.1 | hypothetical protein | - |
| RC27_RS08690 (RC27_08670) | - | 1632966..1633238 (-) | 273 | WP_059111120.1 | hypothetical protein | - |
| RC27_RS08695 (RC27_08675) | - | 1633418..1634188 (+) | 771 | WP_059111121.1 | sel1 repeat family protein | - |
| RC27_RS08700 (RC27_08680) | - | 1634192..1634467 (-) | 276 | WP_004296768.1 | hypothetical protein | - |
| RC27_RS08705 (RC27_08685) | - | 1634454..1634960 (-) | 507 | WP_059111122.1 | Panacea domain-containing protein | - |
| RC27_RS08710 (RC27_08690) | CJE0566 | 1635041..1635694 (-) | 654 | WP_059111151.1 | DNA/RNA non-specific endonuclease | Regulator |
| RC27_RS08715 (RC27_08695) | - | 1635714..1636487 (-) | 774 | WP_002929400.1 | hypothetical protein | - |
| RC27_RS08720 (RC27_08700) | - | 1636484..1637215 (-) | 732 | WP_002929403.1 | S24 family peptidase | - |
| RC27_RS08725 (RC27_08705) | - | 1637356..1637571 (+) | 216 | WP_002925661.1 | hypothetical protein | - |
| RC27_RS09080 | - | 1637667..1637966 (+) | 300 | WP_002861657.1 | hypothetical protein | - |
| RC27_RS08735 (RC27_08715) | - | 1637963..1638964 (+) | 1002 | WP_059111123.1 | hypothetical protein | - |
| RC27_RS08740 (RC27_08720) | - | 1638975..1639625 (+) | 651 | WP_002861659.1 | hypothetical protein | - |
| RC27_RS08745 (RC27_08725) | - | 1639643..1640023 (+) | 381 | WP_002861660.1 | hypothetical protein | - |
| RC27_RS08750 (RC27_08730) | - | 1640023..1640409 (+) | 387 | WP_002826748.1 | terminase small subunit | - |
| RC27_RS08755 (RC27_08735) | - | 1640406..1641698 (+) | 1293 | WP_059111124.1 | terminase | - |
| RC27_RS08760 (RC27_08740) | - | 1641688..1641960 (+) | 273 | WP_057031814.1 | hypothetical protein | - |
| RC27_RS08765 (RC27_08745) | - | 1641941..1643479 (+) | 1539 | WP_002875071.1 | hypothetical protein | - |
| RC27_RS08770 (RC27_08750) | - | 1643472..1643675 (+) | 204 | WP_002875072.1 | hypothetical protein | - |
| RC27_RS08775 (RC27_08755) | - | 1643665..1644312 (+) | 648 | WP_059111125.1 | hypothetical protein | - |
| RC27_RS08780 (RC27_08760) | - | 1644323..1644703 (+) | 381 | WP_059111126.1 | hypothetical protein | - |
| RC27_RS08785 (RC27_08765) | - | 1644968..1646182 (+) | 1215 | WP_059111127.1 | hypothetical protein | - |
| RC27_RS09330 (RC27_08770) | - | 1646179..1649859 (+) | 3681 | WP_059111128.1 | PBECR2 nuclease fold domain-containing protein | - |
| RC27_RS08795 (RC27_08775) | - | 1650240..1651274 (+) | 1035 | WP_002875076.1 | DUF5309 family protein | - |
Sequence
Protein
Download Length: 217 a.a. Molecular weight: 25586.14 Da Isoelectric Point: 9.8271
>NTDB_id=137954 RC27_RS08710 WP_059111151.1 1635041..1635694(-) (CJE0566) [Campylobacter jejuni strain CJ677CC521]
MKKLILLPLLSTLAFADYTQYKPSEDFAKYFTKQNCSQVLDKFYYLNCYDYNYKGTKAVAYKLEAENLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTISNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDSNPQRIKNQIAIPNSYTKILKGDNFKECYQVPNHEVEDENIKKYKVNCDKI
MKKLILLPLLSTLAFADYTQYKPSEDFAKYFTKQNCSQVLDKFYYLNCYDYNYKGTKAVAYKLEAENLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTISNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDSNPQRIKNQIAIPNSYTKILKGDNFKECYQVPNHEVEDENIKKYKVNCDKI
Nucleotide
Download Length: 654 bp
>NTDB_id=137954 RC27_RS08710 WP_059111151.1 1635041..1635694(-) (CJE0566) [Campylobacter jejuni strain CJ677CC521]
GTGAAAAAACTCATACTTTTGCCATTGTTATCCACTCTAGCTTTTGCTGATTACACACAATATAAACCGAGTGAAGATTT
TGCAAAGTATTTTACTAAACAAAACTGCTCTCAAGTTTTAGATAAGTTTTATTATCTAAATTGTTATGATTATAATTATA
AAGGCACTAAAGCTGTAGCTTATAAATTAGAAGCGGAAAATTTAAAAGGCGAACAAATTAAAAAACGCCCACGATTTGAA
GATGATACAAATATACCTAAAAAATACCGCACTACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCATACTAT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCCCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCGCAAAATCCAC
AGATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAACTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGATAGCAACCCTCAAAGAATAAAAAATCAAATTGCTATTCCAAACTCTTACACTAAGATTTTAAA
AGGCGATAATTTTAAAGAATGTTACCAAGTGCCAAATCATGAAGTAGAAGATGAGAATATAAAAAAATATAAGGTTAATT
GTGATAAAATATAA
GTGAAAAAACTCATACTTTTGCCATTGTTATCCACTCTAGCTTTTGCTGATTACACACAATATAAACCGAGTGAAGATTT
TGCAAAGTATTTTACTAAACAAAACTGCTCTCAAGTTTTAGATAAGTTTTATTATCTAAATTGTTATGATTATAATTATA
AAGGCACTAAAGCTGTAGCTTATAAATTAGAAGCGGAAAATTTAAAAGGCGAACAAATTAAAAAACGCCCACGATTTGAA
GATGATACAAATATACCTAAAAAATACCGCACTACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCATACTAT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCCCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCGCAAAATCCAC
AGATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAACTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGATAGCAACCCTCAAAGAATAAAAAATCAAATTGCTATTCCAAACTCTTACACTAAGATTTTAAA
AGGCGATAATTTTAAAGAATGTTACCAAGTGCCAAATCATGAAGTAGAAGATGAGAATATAAAAAAATATAAGGTTAATT
GTGATAAAATATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| CJE0566 | Campylobacter jejuni RM1221 |
93.088 |
100 |
0.931 |
| CJE1441 | Campylobacter jejuni RM1221 |
92.093 |
99.078 |
0.912 |