Detailed information
Bioinformatically predicted
Overview
| Name | CJE0566 | Type | Regulator |
| Locus tag | RC17_RS02570 | Genome accession | NZ_CP010475 |
| Coordinates | 457310..457963 (-) | Length | 217 a.a. |
| NCBI ID | WP_059119152.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain CJ677CC073 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 448028..481263 | 457310..457963 | within | 0 |
Gene organization within MGE regions
Location: 448028..481263
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC17_RS02495 (RC17_02490) | - | 448028..449230 (+) | 1203 | WP_038402048.1 | site-specific integrase | - |
| RC17_RS02500 (RC17_02495) | - | 449227..449397 (-) | 171 | WP_002864902.1 | helix-turn-helix domain-containing protein | - |
| RC17_RS02505 (RC17_02500) | - | 449390..449932 (-) | 543 | WP_038402049.1 | pentapeptide repeat-containing protein | - |
| RC17_RS02510 (RC17_02505) | - | 450052..450741 (-) | 690 | WP_052847760.1 | hypothetical protein | - |
| RC17_RS02515 (RC17_02510) | - | 450747..451250 (-) | 504 | WP_079756635.1 | YopX family protein | - |
| RC17_RS02520 (RC17_02515) | - | 451247..451510 (-) | 264 | WP_059119148.1 | hypothetical protein | - |
| RC17_RS02525 (RC17_02520) | - | 451491..452186 (-) | 696 | WP_059116723.1 | hypothetical protein | - |
| RC17_RS02530 (RC17_02525) | - | 452186..453118 (-) | 933 | WP_059119149.1 | recombinase RecT | - |
| RC17_RS02535 (RC17_02530) | - | 453120..453974 (-) | 855 | WP_022552237.1 | lambda-exonuclease family protein | - |
| RC17_RS02540 (RC17_02535) | - | 453976..454203 (-) | 228 | WP_002874355.1 | helix-turn-helix domain-containing protein | - |
| RC17_RS02545 (RC17_02540) | - | 454194..454451 (-) | 258 | WP_002865124.1 | hypothetical protein | - |
| RC17_RS02550 (RC17_02545) | - | 454442..454711 (-) | 270 | WP_002874357.1 | hypothetical protein | - |
| RC17_RS02555 (RC17_02550) | - | 455274..455546 (-) | 273 | WP_059119150.1 | hypothetical protein | - |
| RC17_RS02560 (RC17_02555) | - | 455725..456495 (+) | 771 | WP_059119151.1 | SEL1-like repeat protein | - |
| RC17_RS02565 (RC17_02560) | - | 456496..457323 (-) | 828 | WP_002875053.1 | hypothetical protein | - |
| RC17_RS02570 (RC17_02565) | CJE0566 | 457310..457963 (-) | 654 | WP_059119152.1 | DNA/RNA non-specific endonuclease | Regulator |
| RC17_RS02575 (RC17_02570) | - | 457979..458482 (-) | 504 | WP_002865051.1 | hypothetical protein | - |
| RC17_RS02580 (RC17_02575) | - | 458469..459674 (-) | 1206 | WP_059119153.1 | AAA family ATPase | - |
| RC17_RS02585 (RC17_02580) | - | 459777..460508 (-) | 732 | WP_059119154.1 | S24 family peptidase | - |
| RC17_RS02590 (RC17_02585) | - | 460649..460864 (+) | 216 | WP_002875060.1 | hypothetical protein | - |
| RC17_RS02595 (RC17_02590) | - | 460851..461285 (+) | 435 | WP_044258295.1 | hypothetical protein | - |
| RC17_RS02600 (RC17_02595) | - | 461282..461659 (+) | 378 | WP_052789488.1 | hypothetical protein | - |
| RC17_RS02605 (RC17_02600) | - | 461656..462657 (+) | 1002 | WP_052783285.1 | hypothetical protein | - |
| RC17_RS02610 (RC17_02605) | - | 462667..463314 (+) | 648 | WP_059119155.1 | hypothetical protein | - |
| RC17_RS02615 (RC17_02610) | - | 463332..463712 (+) | 381 | WP_052805311.1 | crossover junction endodeoxyribonuclease RusA | - |
| RC17_RS02620 (RC17_02615) | - | 463712..464098 (+) | 387 | WP_002826748.1 | terminase small subunit | - |
| RC17_RS02625 (RC17_02620) | - | 464095..465387 (+) | 1293 | WP_059119156.1 | terminase | - |
| RC17_RS02630 (RC17_02625) | - | 465377..465649 (+) | 273 | WP_002781524.1 | hypothetical protein | - |
| RC17_RS02635 (RC17_02630) | - | 465630..467168 (+) | 1539 | WP_059119157.1 | hypothetical protein | - |
| RC17_RS02640 (RC17_02635) | - | 467161..467364 (+) | 204 | WP_000931940.1 | hypothetical protein | - |
| RC17_RS02645 (RC17_02640) | - | 467354..468001 (+) | 648 | WP_048818588.1 | hypothetical protein | - |
| RC17_RS02650 (RC17_02645) | - | 468012..468392 (+) | 381 | WP_002791792.1 | hypothetical protein | - |
| RC17_RS02655 (RC17_02650) | - | 468652..469863 (+) | 1212 | WP_052799630.1 | hypothetical protein | - |
| RC17_RS02660 (RC17_02655) | - | 469863..473495 (+) | 3633 | WP_059119158.1 | hypothetical protein | - |
| RC17_RS02665 (RC17_02660) | - | 473876..474910 (+) | 1035 | WP_002875076.1 | DUF5309 family protein | - |
| RC17_RS02670 (RC17_02665) | - | 474910..475314 (+) | 405 | WP_002861675.1 | hypothetical protein | - |
| RC17_RS02675 (RC17_02670) | - | 475295..475489 (+) | 195 | WP_052773616.1 | hypothetical protein | - |
| RC17_RS02680 (RC17_02675) | - | 475492..478134 (+) | 2643 | WP_059119159.1 | hypothetical protein | - |
| RC17_RS02685 (RC17_02680) | - | 478136..478585 (+) | 450 | WP_002798141.1 | hypothetical protein | - |
| RC17_RS02690 (RC17_02685) | - | 478598..479233 (+) | 636 | WP_002789149.1 | DUF4376 domain-containing protein | - |
| RC17_RS02695 (RC17_02690) | - | 479230..479613 (+) | 384 | WP_002869963.1 | hypothetical protein | - |
| RC17_RS02700 (RC17_02695) | - | 479606..479980 (+) | 375 | WP_002865354.1 | DUF1353 domain-containing protein | - |
| RC17_RS09280 (RC17_02700) | - | 479956..481263 (+) | 1308 | WP_250531194.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 217 a.a. Molecular weight: 25474.01 Da Isoelectric Point: 9.8861
>NTDB_id=137907 RC17_RS02570 WP_059119152.1 457310..457963(-) (CJE0566) [Campylobacter jejuni strain CJ677CC073]
MKKLIILSLLTTLALADYSQYKPSEDFAKHFTKQNCSQVLDKFYYLNCYDYNLKGTKAVAYKLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSSYDRGHTISNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGEIEVL
NLVNYDSNPQRIRNQIAIPSSYTKILKGDNFKECYQVPNHEVEDESIKKYKVNCGKF
MKKLIILSLLTTLALADYSQYKPSEDFAKHFTKQNCSQVLDKFYYLNCYDYNLKGTKAVAYKLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSSYDRGHTISNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGEIEVL
NLVNYDSNPQRIRNQIAIPSSYTKILKGDNFKECYQVPNHEVEDESIKKYKVNCGKF
Nucleotide
Download Length: 654 bp
>NTDB_id=137907 RC17_RS02570 WP_059119152.1 457310..457963(-) (CJE0566) [Campylobacter jejuni strain CJ677CC073]
ATGAAAAAACTTATAATCTTATCATTATTGACAACTCTAGCCTTAGCTGATTATAGCCAATACAAACCAAGTGAAGATTT
TGCTAAGCATTTTACTAAGCAAAACTGCTCACAAGTTTTGGATAAGTTTTATTATCTAAATTGTTATGATTATAATCTTA
AAGGCACTAAAGCTGTAGCTTATAAACTAGAAGCAGATAATCTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACCACATGGAGTGATTATAAAAACAGCAGTTATGATAGAGGGCACACTAT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCACAAAATCCAC
AAATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAGAAATTGAAGTTTTA
AATTTGGTTAATTATGATAGTAATCCACAAAGAATAAGAAATCAAATTGCTATTCCAAGCTCTTACACTAAGATTTTAAA
AGGCGATAATTTTAAAGAATGTTACCAAGTACCAAATCATGAAGTTGAAGATGAGAGTATAAAAAAATATAAGGTTAATT
GTGGCAAATTTTAA
ATGAAAAAACTTATAATCTTATCATTATTGACAACTCTAGCCTTAGCTGATTATAGCCAATACAAACCAAGTGAAGATTT
TGCTAAGCATTTTACTAAGCAAAACTGCTCACAAGTTTTGGATAAGTTTTATTATCTAAATTGTTATGATTATAATCTTA
AAGGCACTAAAGCTGTAGCTTATAAACTAGAAGCAGATAATCTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACCACATGGAGTGATTATAAAAACAGCAGTTATGATAGAGGGCACACTAT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCACAAAATCCAC
AAATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAGAAATTGAAGTTTTA
AATTTGGTTAATTATGATAGTAATCCACAAAGAATAAGAAATCAAATTGCTATTCCAAGCTCTTACACTAAGATTTTAAA
AGGCGATAATTTTAAAGAATGTTACCAAGTACCAAATCATGAAGTTGAAGATGAGAGTATAAAAAAATATAAGGTTAATT
GTGGCAAATTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| CJE0566 | Campylobacter jejuni RM1221 |
89.401 |
100 |
0.894 |
| CJE1441 | Campylobacter jejuni RM1221 |
89.401 |
100 |
0.894 |