Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RC02_RS05215 | Genome accession | NZ_CP010470 |
| Coordinates | 979904..980206 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC026 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 974904..985206
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC02_RS05190 (RC02_05195) | rpsR | 975266..975526 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RC02_RS05195 (RC02_05200) | lon | 975587..977962 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RC02_RS05200 (RC02_05205) | - | 977979..978626 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RC02_RS05205 (RC02_05210) | fliW | 978787..979176 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RC02_RS05210 (RC02_05215) | proC | 979176..979907 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RC02_RS05215 (RC02_05220) | ctsT | 979904..980206 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RC02_RS05220 (RC02_05225) | - | 980203..980865 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| RC02_RS05225 (RC02_05230) | - | 980862..981314 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| RC02_RS05230 (RC02_05235) | hemD | 981311..981940 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RC02_RS05235 (RC02_05240) | thiE | 981918..982550 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RC02_RS05240 (RC02_05245) | thiD | 982540..983352 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RC02_RS05245 (RC02_05250) | - | 983349..984035 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| RC02_RS05250 (RC02_05255) | - | 984032..984793 (-) | 762 | WP_002932753.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=137779 RC02_RS05215 WP_002932767.1 979904..980206(+) (ctsT) [Campylobacter jejuni strain CJ677CC026]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=137779 RC02_RS05215 WP_002932767.1 979904..980206(+) (ctsT) [Campylobacter jejuni strain CJ677CC026]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |