Detailed information
Bioinformatically predicted
Overview
| Name | ctsP | Type | Machinery gene |
| Locus tag | RC16_RS06980 | Genome accession | NZ_CP010468 |
| Coordinates | 1338980..1339588 (-) | Length | 202 a.a. |
| NCBI ID | WP_002932308.1 | Uniprot ID | A0A5T1D3D7 |
| Organism | Campylobacter jejuni strain CJ677CC064 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1333980..1344588
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC16_RS06955 (RC16_06950) | - | 1334137..1334901 (+) | 765 | WP_002932297.1 | TIGR02757 family protein | - |
| RC16_RS06960 (RC16_06955) | - | 1334904..1335668 (+) | 765 | WP_002932298.1 | TSUP family transporter | - |
| RC16_RS06965 (RC16_06960) | ctsF | 1335665..1336843 (-) | 1179 | WP_002932300.1 | type II secretion system F family protein | Machinery gene |
| RC16_RS06970 (RC16_06965) | ctsE | 1336840..1338399 (-) | 1560 | WP_032598692.1 | GspE/PulE family protein | Machinery gene |
| RC16_RS06975 (RC16_06970) | ctsX | 1338389..1338976 (-) | 588 | WP_002932306.1 | hypothetical protein | Machinery gene |
| RC16_RS06980 (RC16_06975) | ctsP | 1338980..1339588 (-) | 609 | WP_002932308.1 | ATP-binding protein | Machinery gene |
| RC16_RS06985 (RC16_06980) | mshL | 1339581..1340993 (-) | 1413 | Protein_1368 | pilus (MSHA type) biogenesis protein MshL | - |
| RC16_RS06990 (RC16_06985) | ctsR | 1340971..1341282 (-) | 312 | WP_002932309.1 | hypothetical protein | Machinery gene |
Sequence
Protein
Download Length: 202 a.a. Molecular weight: 23713.65 Da Isoelectric Point: 9.7896
>NTDB_id=137737 RC16_RS06980 WP_002932308.1 1338980..1339588(-) (ctsP) [Campylobacter jejuni strain CJ677CC064]
MSKIIPFREEIFHQINQILESQKAFIFLWGKSGSGKSVLLQRLAKKYNVDFINENFKDQSFLKEKIEFLISQGQSLIILD
EAGMYDYAMLESIRIYSDSISFVLSSHKKLNILKKEYFKSRLSACFELKNISLLELDNYIKLKFGMNFSNKCLKFLQKIS
QGNLRYIDKTLKSFYEINSFFDTNKSQEYILKLSALENGLLR
MSKIIPFREEIFHQINQILESQKAFIFLWGKSGSGKSVLLQRLAKKYNVDFINENFKDQSFLKEKIEFLISQGQSLIILD
EAGMYDYAMLESIRIYSDSISFVLSSHKKLNILKKEYFKSRLSACFELKNISLLELDNYIKLKFGMNFSNKCLKFLQKIS
QGNLRYIDKTLKSFYEINSFFDTNKSQEYILKLSALENGLLR
Nucleotide
Download Length: 609 bp
>NTDB_id=137737 RC16_RS06980 WP_002932308.1 1338980..1339588(-) (ctsP) [Campylobacter jejuni strain CJ677CC064]
ATGAGTAAAATTATTCCATTTAGAGAAGAAATTTTTCATCAAATCAATCAAATTTTAGAAAGCCAAAAAGCTTTTATTTT
TTTATGGGGAAAAAGCGGTAGTGGTAAAAGTGTATTGTTGCAAAGATTGGCAAAAAAATATAATGTTGATTTTATTAATG
AAAATTTTAAAGATCAGAGTTTCTTAAAAGAAAAAATTGAGTTTTTGATTTCACAAGGTCAGAGTTTAATCATTCTTGAT
GAAGCAGGAATGTATGATTATGCAATGCTAGAAAGCATCAGGATTTATAGTGATTCTATAAGTTTTGTTTTAAGTTCTCA
TAAAAAGTTAAATATACTTAAAAAAGAGTATTTTAAAAGTCGTTTAAGTGCTTGTTTTGAATTGAAAAATATTAGTCTTT
TAGAGCTTGATAATTATATTAAATTGAAATTCGGAATGAATTTTTCAAATAAATGTCTTAAGTTTTTACAAAAAATTTCT
CAAGGAAATTTAAGATATATTGATAAAACTTTAAAAAGTTTTTATGAGATAAATAGTTTTTTTGATACAAACAAAAGTCA
AGAGTATATTTTAAAGCTTAGTGCTTTAGAGAATGGCTTATTAAGGTAA
ATGAGTAAAATTATTCCATTTAGAGAAGAAATTTTTCATCAAATCAATCAAATTTTAGAAAGCCAAAAAGCTTTTATTTT
TTTATGGGGAAAAAGCGGTAGTGGTAAAAGTGTATTGTTGCAAAGATTGGCAAAAAAATATAATGTTGATTTTATTAATG
AAAATTTTAAAGATCAGAGTTTCTTAAAAGAAAAAATTGAGTTTTTGATTTCACAAGGTCAGAGTTTAATCATTCTTGAT
GAAGCAGGAATGTATGATTATGCAATGCTAGAAAGCATCAGGATTTATAGTGATTCTATAAGTTTTGTTTTAAGTTCTCA
TAAAAAGTTAAATATACTTAAAAAAGAGTATTTTAAAAGTCGTTTAAGTGCTTGTTTTGAATTGAAAAATATTAGTCTTT
TAGAGCTTGATAATTATATTAAATTGAAATTCGGAATGAATTTTTCAAATAAATGTCTTAAGTTTTTACAAAAAATTTCT
CAAGGAAATTTAAGATATATTGATAAAACTTTAAAAAGTTTTTATGAGATAAATAGTTTTTTTGATACAAACAAAAGTCA
AGAGTATATTTTAAAGCTTAGTGCTTTAGAGAATGGCTTATTAAGGTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsP | Campylobacter jejuni subsp. jejuni 81-176 |
97.03 |
100 |
0.97 |