Detailed information
Bioinformatically predicted
Overview
| Name | ctsX | Type | Machinery gene |
| Locus tag | RB98_RS06885 | Genome accession | NZ_CP010461 |
| Coordinates | 1321313..1321900 (-) | Length | 195 a.a. |
| NCBI ID | WP_002932306.1 | Uniprot ID | A0A5T1D196 |
| Organism | Campylobacter jejuni strain CJ677CC013 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1316313..1326900
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RB98_RS06865 (RB98_06850) | - | 1317061..1317825 (+) | 765 | WP_002932297.1 | TIGR02757 family protein | - |
| RB98_RS06870 (RB98_06855) | - | 1317828..1318592 (+) | 765 | WP_002932298.1 | TSUP family transporter | - |
| RB98_RS06875 (RB98_06860) | ctsF | 1318589..1319767 (-) | 1179 | WP_002932300.1 | type II secretion system F family protein | Machinery gene |
| RB98_RS06880 (RB98_06865) | ctsE | 1319764..1321323 (-) | 1560 | WP_059117876.1 | GspE/PulE family protein | Machinery gene |
| RB98_RS06885 (RB98_06870) | ctsX | 1321313..1321900 (-) | 588 | WP_002932306.1 | hypothetical protein | Machinery gene |
| RB98_RS06890 (RB98_06875) | ctsP | 1321904..1322510 (-) | 607 | Protein_1359 | ATP-binding protein | - |
| RB98_RS06895 (RB98_06880) | mshL | 1322503..1323915 (-) | 1413 | Protein_1360 | pilus (MSHA type) biogenesis protein MshL | - |
| RB98_RS06900 (RB98_06885) | ctsR | 1323893..1324204 (-) | 312 | WP_002932309.1 | hypothetical protein | Machinery gene |
Sequence
Protein
Download Length: 195 a.a. Molecular weight: 23439.52 Da Isoelectric Point: 9.8409
>NTDB_id=137552 RB98_RS06885 WP_002932306.1 1321313..1321900(-) (ctsX) [Campylobacter jejuni strain CJ677CC013]
MQERIKELELRYKYFLLKKYLKYLFLIVLILVIAFCFFVLMQKYNKQKNIYLQAIEHKKHLEQKIFQAQILQEKNKISRE
KLYKELEEVKAVQENTHISKIEIDSKILNISDLKKSFYQNPSYEKALNLAKKYFDIKAYQKTIFWALKANELDKQKQDSW
LIFAQAKRALGEEKEAQSALDAYINYYGLMELDGK
MQERIKELELRYKYFLLKKYLKYLFLIVLILVIAFCFFVLMQKYNKQKNIYLQAIEHKKHLEQKIFQAQILQEKNKISRE
KLYKELEEVKAVQENTHISKIEIDSKILNISDLKKSFYQNPSYEKALNLAKKYFDIKAYQKTIFWALKANELDKQKQDSW
LIFAQAKRALGEEKEAQSALDAYINYYGLMELDGK
Nucleotide
Download Length: 588 bp
>NTDB_id=137552 RB98_RS06885 WP_002932306.1 1321313..1321900(-) (ctsX) [Campylobacter jejuni strain CJ677CC013]
ATGCAAGAAAGAATTAAAGAACTTGAGCTTAGGTATAAATATTTTTTACTTAAAAAATATTTAAAATATTTATTTTTAAT
TGTTTTAATCTTAGTGATAGCATTTTGTTTTTTTGTGCTAATGCAAAAATATAATAAGCAAAAAAATATTTATTTGCAAG
CTATTGAACATAAAAAGCATTTAGAGCAAAAGATTTTTCAAGCGCAAATTTTACAAGAAAAAAATAAGATTTCTAGGGAA
AAGTTATATAAAGAACTAGAAGAAGTTAAAGCGGTGCAGGAAAATACACATATTAGTAAGATAGAAATTGATTCTAAAAT
TTTAAATATTTCTGATTTAAAAAAATCTTTTTATCAAAATCCAAGCTATGAAAAGGCTTTAAATTTAGCTAAGAAGTATT
TTGATATTAAAGCTTATCAAAAGACAATATTTTGGGCTTTAAAAGCCAATGAACTTGACAAGCAAAAACAAGATTCTTGG
CTGATTTTTGCTCAGGCTAAAAGAGCTTTAGGTGAAGAAAAAGAAGCTCAAAGTGCTTTAGATGCTTATATAAATTATTA
TGGTTTAATGGAATTAGATGGAAAGTAG
ATGCAAGAAAGAATTAAAGAACTTGAGCTTAGGTATAAATATTTTTTACTTAAAAAATATTTAAAATATTTATTTTTAAT
TGTTTTAATCTTAGTGATAGCATTTTGTTTTTTTGTGCTAATGCAAAAATATAATAAGCAAAAAAATATTTATTTGCAAG
CTATTGAACATAAAAAGCATTTAGAGCAAAAGATTTTTCAAGCGCAAATTTTACAAGAAAAAAATAAGATTTCTAGGGAA
AAGTTATATAAAGAACTAGAAGAAGTTAAAGCGGTGCAGGAAAATACACATATTAGTAAGATAGAAATTGATTCTAAAAT
TTTAAATATTTCTGATTTAAAAAAATCTTTTTATCAAAATCCAAGCTATGAAAAGGCTTTAAATTTAGCTAAGAAGTATT
TTGATATTAAAGCTTATCAAAAGACAATATTTTGGGCTTTAAAAGCCAATGAACTTGACAAGCAAAAACAAGATTCTTGG
CTGATTTTTGCTCAGGCTAAAAGAGCTTTAGGTGAAGAAAAAGAAGCTCAAAGTGCTTTAGATGCTTATATAAATTATTA
TGGTTTAATGGAATTAGATGGAAAGTAG
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsX | Campylobacter jejuni subsp. jejuni 81-176 |
97.949 |
100 |
0.979 |