Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | APQ97_RS10765 | Genome accession | NZ_CP012911 |
| Coordinates | 2153146..2155245 (-) | Length | 699 a.a. |
| NCBI ID | WP_053866426.1 | Uniprot ID | - |
| Organism | Streptococcus suis strain NSUI060 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2148146..2160245
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APQ97_RS10750 (APQ97_10745) | - | 2148265..2148972 (+) | 708 | WP_004194205.1 | UTRA domain-containing protein | - |
| APQ97_RS10755 (APQ97_10750) | glgP | 2149199..2151463 (-) | 2265 | WP_004194208.1 | glycogen/starch/alpha-glucan family phosphorylase | - |
| APQ97_RS10760 (APQ97_10755) | malQ | 2151456..2152964 (-) | 1509 | WP_004194210.1 | 4-alpha-glucanotransferase | - |
| APQ97_RS10765 (APQ97_10760) | clpC | 2153146..2155245 (-) | 2100 | WP_053866426.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| APQ97_RS10770 (APQ97_10765) | - | 2155660..2156070 (-) | 411 | WP_004194216.1 | peptide deformylase | - |
| APQ97_RS10775 (APQ97_10770) | - | 2156090..2157469 (-) | 1380 | WP_004194219.1 | P-loop NTPase fold protein | - |
| APQ97_RS10780 (APQ97_10775) | - | 2157741..2158943 (+) | 1203 | WP_002935596.1 | IS110 family transposase | - |
Sequence
Protein
Download Length: 699 a.a. Molecular weight: 77206.13 Da Isoelectric Point: 4.8584
>NTDB_id=137448 APQ97_RS10765 WP_053866426.1 2153146..2155245(-) (clpC) [Streptococcus suis strain NSUI060]
MNNNFNNFNNMDDIFNQLMGNMGGYSTERRRYSINGREVTPEEFAMYRQTGRLPQTEEVAQTQAKGQIKSDGILAKLGRN
LTQDAREGKLDPVIGRNKEIQETAEILARRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDISGLEA
GTQYRGAFEENVQNLVDEVKKAGNIILFFDEIHQILGAGSTGGDSGSKGLADILKPALSRGELTVIGATTQDEYRNTIRK
NAALARRFNEVKVNAPSAEDTYQILKGIKPLYEAHHNIELPDEVLRAAVDYSVQYIPPRSLPDKAIDLIDVTAAHLAAQH
PVTDIQTLEAEMAEAKQLQLEAAEKEDYEKALNEKVRIDKLQKQIDNHTEQQKVVATVNDVAQAVERMTGIPVSQMGASD
IERLKELKNRLAANVIGQDDAVEAVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLALDLFGNKDAIIRLDMS
EYSDRTAVSKLIGTTAGYIGYDDNSHTLTERVRRNPYSIVLLDEIEKADPQVITLLLQVLDDGHLTDGQGNQVNFKNTII
IATSNAGFGYGMAEGEENQDIMDRIAPFFRPEFLNRFNAVIEFKHLDKDDLKAIVELLLAQVNNTLAKKGIQLTVTEAAK
GFLMEEGYDKAMGARPLRRVIENQIRDKVTDYYLDHVDVKYLEADVVDGSIQIKEQSFA
MNNNFNNFNNMDDIFNQLMGNMGGYSTERRRYSINGREVTPEEFAMYRQTGRLPQTEEVAQTQAKGQIKSDGILAKLGRN
LTQDAREGKLDPVIGRNKEIQETAEILARRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDISGLEA
GTQYRGAFEENVQNLVDEVKKAGNIILFFDEIHQILGAGSTGGDSGSKGLADILKPALSRGELTVIGATTQDEYRNTIRK
NAALARRFNEVKVNAPSAEDTYQILKGIKPLYEAHHNIELPDEVLRAAVDYSVQYIPPRSLPDKAIDLIDVTAAHLAAQH
PVTDIQTLEAEMAEAKQLQLEAAEKEDYEKALNEKVRIDKLQKQIDNHTEQQKVVATVNDVAQAVERMTGIPVSQMGASD
IERLKELKNRLAANVIGQDDAVEAVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLALDLFGNKDAIIRLDMS
EYSDRTAVSKLIGTTAGYIGYDDNSHTLTERVRRNPYSIVLLDEIEKADPQVITLLLQVLDDGHLTDGQGNQVNFKNTII
IATSNAGFGYGMAEGEENQDIMDRIAPFFRPEFLNRFNAVIEFKHLDKDDLKAIVELLLAQVNNTLAKKGIQLTVTEAAK
GFLMEEGYDKAMGARPLRRVIENQIRDKVTDYYLDHVDVKYLEADVVDGSIQIKEQSFA
Nucleotide
Download Length: 2100 bp
>NTDB_id=137448 APQ97_RS10765 WP_053866426.1 2153146..2155245(-) (clpC) [Streptococcus suis strain NSUI060]
ATGAACAACAATTTCAATAATTTTAACAATATGGACGATATTTTCAATCAACTTATGGGGAACATGGGTGGATACAGTAC
AGAACGACGTCGCTATTCTATCAATGGGCGTGAAGTGACACCGGAGGAATTCGCTATGTACCGTCAGACTGGTCGCCTGC
CACAGACCGAAGAAGTGGCTCAAACACAGGCTAAAGGTCAGATAAAGTCAGATGGGATTCTTGCAAAACTGGGGCGCAAT
TTGACCCAAGATGCGCGTGAAGGTAAGTTGGATCCAGTCATTGGACGAAACAAGGAAATCCAAGAAACAGCGGAAATTTT
GGCTCGCCGTACGAAAAATAATCCTGTTTTGGTCGGTGATGCTGGTGTTGGTAAAACTGCGGTAGTAGAAGGATTGGCTC
AAGCCATTGTCAACGGAGATGTGCCAGCAGCCATTAAGAACAAGGAAATCATCTCCATTGACATTTCTGGCTTGGAGGCA
GGGACCCAGTACCGTGGAGCTTTTGAGGAAAATGTGCAAAATCTTGTGGATGAAGTCAAAAAAGCTGGAAATATCATTCT
CTTCTTTGATGAAATTCATCAGATTTTGGGAGCTGGTAGCACTGGCGGAGACTCAGGTTCCAAGGGTTTAGCGGATATTC
TCAAACCAGCTTTATCCCGTGGGGAATTGACGGTTATCGGTGCCACTACACAGGACGAATACCGCAATACCATTCGTAAG
AACGCCGCACTGGCTCGTCGTTTCAATGAAGTCAAGGTTAATGCTCCGTCCGCAGAAGACACCTACCAGATTTTGAAAGG
GATTAAGCCGCTTTATGAAGCCCACCACAATATTGAATTGCCAGATGAGGTTTTGAGAGCTGCGGTTGATTATTCTGTCC
AATATATTCCACCACGTAGCTTGCCTGATAAGGCTATTGACCTGATCGATGTGACCGCTGCACACTTGGCTGCACAACAT
CCTGTGACAGATATTCAGACCTTGGAAGCAGAAATGGCTGAGGCAAAACAGTTGCAGTTGGAAGCGGCTGAGAAAGAGGA
TTATGAAAAAGCCTTGAATGAAAAAGTCCGTATTGATAAGCTACAAAAACAGATTGATAATCATACGGAGCAACAGAAAG
TGGTGGCGACTGTTAATGATGTGGCTCAGGCGGTTGAGCGGATGACAGGAATTCCAGTCTCTCAAATGGGAGCTTCTGAC
ATTGAACGACTCAAGGAATTGAAAAATCGTCTGGCAGCTAACGTTATCGGTCAAGACGATGCGGTGGAAGCTGTATCTCG
TGCCATTCGTCGGAATCGTGCAGGTTTTGATGATGGCAACCGTCCGATTGGTTCCTTCCTCTTTGTCGGTCCGACAGGTG
TGGGTAAGACAGAGCTGGCTAAGCAACTAGCACTAGACTTGTTTGGTAACAAGGATGCCATTATTCGTTTGGATATGTCT
GAATACAGCGATCGGACAGCCGTTTCCAAATTAATCGGTACCACAGCTGGCTACATTGGCTACGATGACAATTCCCATAC
TCTTACCGAGCGTGTCCGCCGCAATCCGTACTCAATCGTTCTTCTGGATGAGATTGAAAAAGCTGATCCACAAGTGATTA
CCCTTCTCTTGCAAGTGCTAGATGACGGGCATTTGACTGATGGACAGGGCAACCAAGTTAACTTTAAAAATACCATTATT
ATCGCGACTTCTAATGCAGGTTTTGGTTATGGAATGGCAGAAGGTGAAGAAAATCAAGACATCATGGACCGTATCGCACC
ATTCTTCCGTCCGGAGTTCCTTAATCGTTTTAACGCAGTTATCGAATTCAAGCACTTGGATAAAGATGATCTCAAAGCCA
TTGTAGAATTACTCTTGGCCCAGGTCAATAATACCCTGGCGAAGAAAGGCATCCAATTAACGGTAACGGAAGCCGCCAAA
GGATTCTTGATGGAAGAAGGCTATGACAAGGCCATGGGAGCCCGTCCTCTGCGTCGTGTGATTGAAAATCAGATTCGAGA
CAAGGTAACAGATTACTATTTGGATCATGTTGATGTCAAATATCTGGAAGCGGATGTGGTTGATGGAAGCATCCAAATAA
AAGAGCAAAGCTTTGCTTAA
ATGAACAACAATTTCAATAATTTTAACAATATGGACGATATTTTCAATCAACTTATGGGGAACATGGGTGGATACAGTAC
AGAACGACGTCGCTATTCTATCAATGGGCGTGAAGTGACACCGGAGGAATTCGCTATGTACCGTCAGACTGGTCGCCTGC
CACAGACCGAAGAAGTGGCTCAAACACAGGCTAAAGGTCAGATAAAGTCAGATGGGATTCTTGCAAAACTGGGGCGCAAT
TTGACCCAAGATGCGCGTGAAGGTAAGTTGGATCCAGTCATTGGACGAAACAAGGAAATCCAAGAAACAGCGGAAATTTT
GGCTCGCCGTACGAAAAATAATCCTGTTTTGGTCGGTGATGCTGGTGTTGGTAAAACTGCGGTAGTAGAAGGATTGGCTC
AAGCCATTGTCAACGGAGATGTGCCAGCAGCCATTAAGAACAAGGAAATCATCTCCATTGACATTTCTGGCTTGGAGGCA
GGGACCCAGTACCGTGGAGCTTTTGAGGAAAATGTGCAAAATCTTGTGGATGAAGTCAAAAAAGCTGGAAATATCATTCT
CTTCTTTGATGAAATTCATCAGATTTTGGGAGCTGGTAGCACTGGCGGAGACTCAGGTTCCAAGGGTTTAGCGGATATTC
TCAAACCAGCTTTATCCCGTGGGGAATTGACGGTTATCGGTGCCACTACACAGGACGAATACCGCAATACCATTCGTAAG
AACGCCGCACTGGCTCGTCGTTTCAATGAAGTCAAGGTTAATGCTCCGTCCGCAGAAGACACCTACCAGATTTTGAAAGG
GATTAAGCCGCTTTATGAAGCCCACCACAATATTGAATTGCCAGATGAGGTTTTGAGAGCTGCGGTTGATTATTCTGTCC
AATATATTCCACCACGTAGCTTGCCTGATAAGGCTATTGACCTGATCGATGTGACCGCTGCACACTTGGCTGCACAACAT
CCTGTGACAGATATTCAGACCTTGGAAGCAGAAATGGCTGAGGCAAAACAGTTGCAGTTGGAAGCGGCTGAGAAAGAGGA
TTATGAAAAAGCCTTGAATGAAAAAGTCCGTATTGATAAGCTACAAAAACAGATTGATAATCATACGGAGCAACAGAAAG
TGGTGGCGACTGTTAATGATGTGGCTCAGGCGGTTGAGCGGATGACAGGAATTCCAGTCTCTCAAATGGGAGCTTCTGAC
ATTGAACGACTCAAGGAATTGAAAAATCGTCTGGCAGCTAACGTTATCGGTCAAGACGATGCGGTGGAAGCTGTATCTCG
TGCCATTCGTCGGAATCGTGCAGGTTTTGATGATGGCAACCGTCCGATTGGTTCCTTCCTCTTTGTCGGTCCGACAGGTG
TGGGTAAGACAGAGCTGGCTAAGCAACTAGCACTAGACTTGTTTGGTAACAAGGATGCCATTATTCGTTTGGATATGTCT
GAATACAGCGATCGGACAGCCGTTTCCAAATTAATCGGTACCACAGCTGGCTACATTGGCTACGATGACAATTCCCATAC
TCTTACCGAGCGTGTCCGCCGCAATCCGTACTCAATCGTTCTTCTGGATGAGATTGAAAAAGCTGATCCACAAGTGATTA
CCCTTCTCTTGCAAGTGCTAGATGACGGGCATTTGACTGATGGACAGGGCAACCAAGTTAACTTTAAAAATACCATTATT
ATCGCGACTTCTAATGCAGGTTTTGGTTATGGAATGGCAGAAGGTGAAGAAAATCAAGACATCATGGACCGTATCGCACC
ATTCTTCCGTCCGGAGTTCCTTAATCGTTTTAACGCAGTTATCGAATTCAAGCACTTGGATAAAGATGATCTCAAAGCCA
TTGTAGAATTACTCTTGGCCCAGGTCAATAATACCCTGGCGAAGAAAGGCATCCAATTAACGGTAACGGAAGCCGCCAAA
GGATTCTTGATGGAAGAAGGCTATGACAAGGCCATGGGAGCCCGTCCTCTGCGTCGTGTGATTGAAAATCAGATTCGAGA
CAAGGTAACAGATTACTATTTGGATCATGTTGATGTCAAATATCTGGAAGCGGATGTGGTTGATGGAAGCATCCAAATAA
AAGAGCAAAGCTTTGCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Lactococcus lactis subsp. cremoris KW2 |
47.234 |
100 |
0.476 |
| clpE | Streptococcus pneumoniae Rx1 |
49.689 |
92.132 |
0.458 |
| clpE | Streptococcus pneumoniae D39 |
49.689 |
92.132 |
0.458 |
| clpE | Streptococcus pneumoniae R6 |
49.689 |
92.132 |
0.458 |
| clpE | Streptococcus pneumoniae TIGR4 |
49.689 |
92.132 |
0.458 |
| clpE | Streptococcus mutans UA159 |
49.61 |
91.702 |
0.455 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
44.737 |
92.418 |
0.413 |
| clpC | Streptococcus pneumoniae Rx1 |
41.617 |
95.565 |
0.398 |
| clpC | Streptococcus pneumoniae D39 |
41.617 |
95.565 |
0.398 |
| clpC | Streptococcus pneumoniae TIGR4 |
41.379 |
95.422 |
0.395 |
| clpC | Streptococcus mutans UA159 |
43.366 |
88.412 |
0.383 |
| clpC | Streptococcus thermophilus LMD-9 |
42.72 |
89.413 |
0.382 |
| clpC | Streptococcus thermophilus LMG 18311 |
42.56 |
89.413 |
0.381 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
42.834 |
88.841 |
0.381 |