Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | SD89_RS00685 | Genome accession | NZ_CP010449 |
| Coordinates | 105612..106565 (+) | Length | 317 a.a. |
| NCBI ID | WP_053308149.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain NGAS322 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 100612..111565
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SD89_RS00645 (SD89_00645) | - | 101439..101804 (+) | 366 | WP_002986560.1 | DUF1033 family protein | - |
| SD89_RS00650 (SD89_00650) | comYA | 101897..102835 (+) | 939 | WP_002993471.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SD89_RS00655 (SD89_00655) | comYB | 102771..103805 (+) | 1035 | WP_227875237.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SD89_RS00660 (SD89_00660) | comGC | 103807..104133 (+) | 327 | WP_053308148.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SD89_RS00665 (SD89_00665) | comGD | 104108..104536 (+) | 429 | WP_002986548.1 | competence type IV pilus minor pilin ComGD | - |
| SD89_RS00670 (SD89_00670) | comGE | 104493..104777 (+) | 285 | WP_011284422.1 | competence type IV pilus minor pilin ComGE | - |
| SD89_RS00675 (SD89_00675) | comYF | 104770..105204 (+) | 435 | WP_002992738.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SD89_RS00680 (SD89_00680) | comGG | 105188..105514 (+) | 327 | WP_010921801.1 | competence type IV pilus minor pilin ComGG | - |
| SD89_RS00685 (SD89_00685) | comYH | 105612..106565 (+) | 954 | WP_053308149.1 | class I SAM-dependent methyltransferase | Machinery gene |
| SD89_RS00690 (SD89_00690) | - | 106624..107820 (+) | 1197 | WP_002987791.1 | acetate kinase | - |
| SD89_RS00695 (SD89_00695) | - | 108006..108314 (+) | 309 | Protein_91 | hypothetical protein | - |
| SD89_RS00700 (SD89_00700) | proC | 108397..109167 (-) | 771 | WP_011284426.1 | pyrroline-5-carboxylate reductase | - |
| SD89_RS00705 (SD89_00705) | pepA | 109215..110282 (-) | 1068 | WP_011284427.1 | glutamyl aminopeptidase | - |
| SD89_RS00710 (SD89_00710) | - | 110747..111028 (+) | 282 | WP_024623420.1 | DUF4651 domain-containing protein | - |
| SD89_RS00715 (SD89_00715) | - | 111028..111345 (+) | 318 | WP_053308151.1 | thioredoxin family protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36023.21 Da Isoelectric Point: 4.7205
>NTDB_id=137314 SD89_RS00685 WP_053308149.1 105612..106565(+) (comYH) [Streptococcus pyogenes strain NGAS322]
MTFEKIEEAYQLLLENCQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEILEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEIIDSS
AHFIQEDAVRPQLLKESDIVISDLPVGYYPNDDIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKQWLKDYAQVVALIMLPDSIFGHPSNAKSIIVLQKQIDHPMETFVYPIRDLKLAENIHDFMENFKKWKLSNVN
MTFEKIEEAYQLLLENCQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEILEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEIIDSS
AHFIQEDAVRPQLLKESDIVISDLPVGYYPNDDIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKQWLKDYAQVVALIMLPDSIFGHPSNAKSIIVLQKQIDHPMETFVYPIRDLKLAENIHDFMENFKKWKLSNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=137314 SD89_RS00685 WP_053308149.1 105612..106565(+) (comYH) [Streptococcus pyogenes strain NGAS322]
ATGACTTTTGAAAAAATTGAAGAAGCTTATCAGCTGCTCTTAGAGAACTGTCAACTAATTGAAAATGATCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACT
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGATACTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTGAGATAATAGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGATATTGCCAAACGGTACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCATTTATTAA
TGGAACAGTCTTTAAAATACTTGAAAAAAGACGGTTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGGTGGTGGCCTTGATTATGCTACCAGATTCTATTTTTGGTCA
TCCCTCAAATGCCAAGTCCATTATTGTCTTACAAAAACAAATAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGAAACTGAGTAATGTCAATTAA
ATGACTTTTGAAAAAATTGAAGAAGCTTATCAGCTGCTCTTAGAGAACTGTCAACTAATTGAAAATGATCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACT
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGATACTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTGAGATAATAGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGATATTGCCAAACGGTACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCATTTATTAA
TGGAACAGTCTTTAAAATACTTGAAAAAAGACGGTTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGGTGGTGGCCTTGATTATGCTACCAGATTCTATTTTTGGTCA
TCCCTCAAATGCCAAGTCCATTATTGTCTTACAAAAACAAATAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGAAACTGAGTAATGTCAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
66.456 |
99.685 |
0.662 |
| comYH | Streptococcus mutans UA140 |
66.139 |
99.685 |
0.659 |