Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   Achr_RS19290 Genome accession   NZ_CP010415
Coordinates   4270276..4270683 (-) Length   135 a.a.
NCBI ID   WP_039808301.1    Uniprot ID   A0A4Q9VC40
Organism   Azotobacter chroococcum NCIMB 8003     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 4265276..4275683
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Achr_RS19270 (Achr_38290) - 4266088..4266975 (-) 888 WP_052263992.1 CheR family methyltransferase -
  Achr_RS19275 (Achr_38300) - 4267037..4269085 (-) 2049 WP_039806733.1 methyl-accepting chemotaxis protein -
  Achr_RS19280 (Achr_38310) - 4269270..4269812 (-) 543 WP_039806735.1 chemotaxis protein CheW -
  Achr_RS19285 (Achr_38320) pilH 4269864..4270229 (-) 366 WP_039806737.1 twitching motility response regulator PilH -
  Achr_RS19290 (Achr_38330) pilG 4270276..4270683 (-) 408 WP_039808301.1 twitching motility response regulator PilG Regulator
  Achr_RS19295 (Achr_38340) gshB 4270915..4271871 (+) 957 WP_039806739.1 glutathione synthase -
  Achr_RS19300 (Achr_38350) - 4271971..4272864 (+) 894 WP_039806743.1 energy transducer TonB -
  Achr_RS19305 (Achr_38360) - 4272951..4273517 (+) 567 WP_377802447.1 YqgE/AlgH family protein -
  Achr_RS19310 (Achr_38370) ruvX 4273514..4273942 (+) 429 WP_039806749.1 Holliday junction resolvase RuvX -
  Achr_RS19315 (Achr_38380) pyrR 4273987..4274496 (+) 510 WP_039806751.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  Achr_RS19320 (Achr_38390) - 4274515..4275531 (+) 1017 WP_039806752.1 aspartate carbamoyltransferase catalytic subunit -

Sequence


Protein


Download         Length: 135 a.a.        Molecular weight: 14822.23 Da        Isoelectric Point: 7.2441

>NTDB_id=136996 Achr_RS19290 WP_039808301.1 4270276..4270683(-) (pilG) [Azotobacter chroococcum NCIMB 8003]
MEQHSDGLKVMVIDDSKTIRRTAETLLKKVGCEVITAVDGFDALAKIADGHPRIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIRAHVPDFVPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=136996 Achr_RS19290 WP_039808301.1 4270276..4270683(-) (pilG) [Azotobacter chroococcum NCIMB 8003]
ATGGAACAGCATTCCGACGGTTTGAAGGTCATGGTGATCGACGATTCCAAGACGATTCGTCGCACTGCGGAAACTCTGCT
GAAGAAGGTGGGGTGCGAGGTCATCACCGCCGTGGACGGCTTCGATGCCCTGGCCAAGATCGCCGATGGCCATCCGCGGA
TCATCTTCGTCGATATCATGATGCCGCGACTGGACGGCTATCAGACCTGTGCCTTGATCAAGAACAACAGCGCATTCAAG
TCCACGCCGGTGATCATGCTGTCCTCCAAGGACGGTCTGTTCGACAAGGCCAAGGGACGCATTGTCGGCTCCGACCAATA
TCTGACCAAGCCCTTCAGCAAAGAAGAGCTGCTGGGCGCGATCAGGGCCCATGTGCCCGATTTCGTCCCGGTAGAGCAAG
CATCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4Q9VC40

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.6

92.593

0.719

  vicR Streptococcus mutans UA159

41.27

93.333

0.385


Multiple sequence alignment