Detailed information
Bioinformatically predicted
Overview
| Name | pilZ | Type | Machinery gene |
| Locus tag | AO356_RS20225 | Genome accession | NZ_CP012831 |
| Coordinates | 4517677..4518033 (+) | Length | 118 a.a. |
| NCBI ID | WP_060741236.1 | Uniprot ID | - |
| Organism | Pseudomonas fluorescens strain FW300-N2C3 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4512677..4523033
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AO356_RS20200 (AO356_20175) | fabF | 4512772..4514016 (+) | 1245 | WP_060741232.1 | beta-ketoacyl-ACP synthase II | - |
| AO356_RS20205 (AO356_20180) | pabC | 4514016..4514831 (+) | 816 | WP_060741233.1 | aminodeoxychorismate lyase | - |
| AO356_RS20210 (AO356_20185) | mltG | 4514835..4515995 (+) | 1161 | WP_060741234.1 | endolytic transglycosylase MltG | - |
| AO356_RS20215 (AO356_20190) | tmk | 4516016..4516648 (+) | 633 | WP_060743157.1 | dTMP kinase | - |
| AO356_RS20220 (AO356_20195) | - | 4516641..4517627 (+) | 987 | WP_060741235.1 | DNA polymerase III subunit delta' | - |
| AO356_RS20225 (AO356_20200) | pilZ | 4517677..4518033 (+) | 357 | WP_060741236.1 | PilZ domain-containing protein | Machinery gene |
| AO356_RS20230 (AO356_20205) | - | 4518045..4518839 (+) | 795 | WP_060741237.1 | TatD family hydrolase | - |
| AO356_RS20235 (AO356_20210) | - | 4519224..4519862 (+) | 639 | WP_060741238.1 | TetR/AcrR family transcriptional regulator | - |
| AO356_RS20240 (AO356_20215) | - | 4520019..4520987 (+) | 969 | WP_060741239.1 | GTP 3',8-cyclase MoaA | - |
| AO356_RS20245 (AO356_20220) | - | 4521173..4521778 (+) | 606 | WP_060741240.1 | DUF4823 domain-containing protein | - |
| AO356_RS20250 (AO356_20225) | - | 4521794..4522354 (+) | 561 | WP_060741241.1 | DUF1285 domain-containing protein | - |
Sequence
Protein
Download Length: 118 a.a. Molecular weight: 12837.75 Da Isoelectric Point: 9.5118
>NTDB_id=136768 AO356_RS20225 WP_060741236.1 4517677..4518033(+) (pilZ) [Pseudomonas fluorescens strain FW300-N2C3]
MNEPVSPGPRNGILSLTIKDKSVLYAAYMPFIKNGGLFIPTNKHYRLGDEVFMLLSLMDEAEKIPVAGKVIWLTPKGAQG
NRAAGVGVQFNDGDNSARNQIETHLAGSLKSDRPTHTM
MNEPVSPGPRNGILSLTIKDKSVLYAAYMPFIKNGGLFIPTNKHYRLGDEVFMLLSLMDEAEKIPVAGKVIWLTPKGAQG
NRAAGVGVQFNDGDNSARNQIETHLAGSLKSDRPTHTM
Nucleotide
Download Length: 357 bp
>NTDB_id=136768 AO356_RS20225 WP_060741236.1 4517677..4518033(+) (pilZ) [Pseudomonas fluorescens strain FW300-N2C3]
ATGAACGAACCTGTCAGTCCCGGCCCACGCAACGGCATCCTGTCCCTGACCATCAAGGACAAGTCGGTGCTTTACGCCGC
CTACATGCCCTTCATCAAGAACGGCGGCCTGTTCATTCCGACCAACAAGCATTATCGCTTGGGCGATGAAGTGTTCATGC
TCTTGAGCCTGATGGACGAGGCGGAGAAAATTCCGGTCGCCGGCAAGGTGATCTGGCTGACCCCCAAGGGCGCCCAGGGC
AATCGGGCCGCCGGCGTAGGCGTGCAGTTCAACGACGGCGACAATTCGGCCCGCAATCAGATCGAAACCCACTTGGCCGG
CTCCCTGAAGTCCGACCGTCCCACCCATACGATGTAG
ATGAACGAACCTGTCAGTCCCGGCCCACGCAACGGCATCCTGTCCCTGACCATCAAGGACAAGTCGGTGCTTTACGCCGC
CTACATGCCCTTCATCAAGAACGGCGGCCTGTTCATTCCGACCAACAAGCATTATCGCTTGGGCGATGAAGTGTTCATGC
TCTTGAGCCTGATGGACGAGGCGGAGAAAATTCCGGTCGCCGGCAAGGTGATCTGGCTGACCCCCAAGGGCGCCCAGGGC
AATCGGGCCGCCGGCGTAGGCGTGCAGTTCAACGACGGCGACAATTCGGCCCGCAATCAGATCGAAACCCACTTGGCCGG
CTCCCTGAAGTCCGACCGTCCCACCCATACGATGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilZ | Legionella pneumophila str. Paris |
48.148 |
91.525 |
0.441 |
| pilZ | Legionella pneumophila strain ERS1305867 |
48.148 |
91.525 |
0.441 |