Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AO356_RS13500 Genome accession   NZ_CP012831
Coordinates   3054562..3054990 (+) Length   142 a.a.
NCBI ID   WP_060740211.1    Uniprot ID   -
Organism   Pseudomonas fluorescens strain FW300-N2C3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3049562..3059990
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AO356_RS13470 (AO356_13450) - 3049606..3050610 (-) 1005 WP_003177495.1 aspartate carbamoyltransferase catalytic subunit -
  AO356_RS13475 (AO356_13455) pyrR 3050635..3051141 (-) 507 WP_060740208.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  AO356_RS13480 (AO356_13460) ruvX 3051227..3051664 (-) 438 WP_003177497.1 Holliday junction resolvase RuvX -
  AO356_RS13485 (AO356_13465) - 3051664..3052233 (-) 570 WP_053126215.1 YqgE/AlgH family protein -
  AO356_RS13490 (AO356_13470) - 3052411..3053307 (-) 897 WP_060740209.1 energy transducer TonB -
  AO356_RS13495 (AO356_13475) gshB 3053384..3054337 (-) 954 WP_060740210.1 glutathione synthase -
  AO356_RS13500 (AO356_13480) pilG 3054562..3054990 (+) 429 WP_060740211.1 response regulator Regulator
  AO356_RS13505 (AO356_13485) pilH 3055039..3055404 (+) 366 WP_003206465.1 twitching motility response regulator PilH Machinery gene
  AO356_RS13510 (AO356_13490) - 3055415..3055954 (+) 540 WP_060740212.1 chemotaxis protein CheW -
  AO356_RS13515 (AO356_13495) - 3056113..3058176 (+) 2064 WP_060740213.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 15481.90 Da        Isoelectric Point: 7.4360

>NTDB_id=136739 AO356_RS13500 WP_060740211.1 3054562..3054990(+) (pilG) [Pseudomonas fluorescens strain FW300-N2C3]
MAEHSTQQQPSALKVMVIDDSKTIRRTAETLLRNVGCEVITAIDGFDALAKIADHHPGIIFVDIMMPRLDGYQTCALIKN
NSAFKATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLGAIQAHVPGFAAVQPHQAH

Nucleotide


Download         Length: 429 bp        

>NTDB_id=136739 AO356_RS13500 WP_060740211.1 3054562..3054990(+) (pilG) [Pseudomonas fluorescens strain FW300-N2C3]
ATGGCAGAGCACTCTACGCAACAGCAACCCAGCGCCTTGAAGGTCATGGTCATCGACGACTCGAAGACCATCCGCCGCAC
CGCCGAAACCTTGCTGCGCAACGTGGGCTGCGAGGTGATCACGGCGATCGACGGTTTCGATGCCCTGGCCAAGATCGCCG
ACCATCATCCGGGCATCATCTTTGTCGACATCATGATGCCGCGCCTCGATGGCTACCAGACCTGTGCCCTGATCAAGAAC
AACAGCGCATTCAAGGCCACGCCGGTGATCATGCTGTCGTCCCGGGATGGGTTGTTCGACAAGGCCAAGGGGCGCATCGT
CGGTTCCGATCAGTTTTTGACCAAGCCGTTCAGCAAGGAAGAACTGCTGGGGGCGATACAGGCCCATGTCCCGGGCTTTG
CCGCTGTCCAGCCGCACCAGGCACATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(15-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.119

83.099

0.641