Detailed information NTG0136616

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: RR32_RS10060
• Genome accession: NZ_CP010368
• Coordinates: 2124760..2125629 (-)
• Length: 289 a.a.
• NCBI ID: WP_032047939.1
• Uniprot ID: -
• Organism: Acinetobacter nosocomialis strain 6411
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2119760..2130629

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RR32_RS10030 (RR32_10035)	-	2120070..2120510 (-)	441	WP_032047936.1	SRPBCC family protein	-
RR32_RS10035 (RR32_10040)	tadA	2120580..2121083 (-)	504	WP_032047937.1	tRNA adenosine(34) deaminase TadA	-
RR32_RS10040 (RR32_10045)	-	2121090..2122214 (-)	1125	WP_006580787.1	enoyl-CoA hydratase/isomerase family protein	-
RR32_RS10045 (RR32_10050)	ung	2122211..2122924 (-)	714	WP_002049829.1	uracil-DNA glycosylase	-
RR32_RS10050 (RR32_10055)	-	2122975..2123571 (-)	597	WP_004887474.1	6-pyruvoyl trahydropterin synthase family protein	-
RR32_RS10055 (RR32_10060)	gspK	2123801..2124760 (-)	960	WP_039247875.1	type II secretion system minor pseudopilin GspK	-
RR32_RS10060 (RR32_10065)	xcpW	2124760..2125629 (-)	870	WP_032047939.1	type II secretion system minor pseudopilin GspJ	Machinery gene
RR32_RS10065 (RR32_10070)	xcpV	2125629..2126009 (-)	381	WP_016804844.1	type II secretion system minor pseudopilin GspI	Machinery gene
RR32_RS10070 (RR32_10075)	-	2125999..2126550 (-)	552	WP_050049513.1	type II secretion system protein	-
RR32_RS10075 (RR32_10080)	-	2126560..2127168 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
RR32_RS10080 (RR32_10085)	-	2127206..2127979 (-)	774	WP_004709116.1	TatD family hydrolase	-
RR32_RS10085 (RR32_10090)	-	2127997..2128338 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
RR32_RS10090 (RR32_10095)	-	2128351..2129331 (-)	981	WP_032047942.1	DNA polymerase III subunit delta'	-
RR32_RS10095 (RR32_10100)	kdsB	2129343..2130104 (-)	762	WP_004887485.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 289 a.a.
• Molecular weight: 32665.27 Da
• Isoelectric Point: 9.8480

>NTDB_id=136616 RR32_RS10060 WP_032047939.1 2124760..2125629(-) (xcpW) [Acinetobacter nosocomialis strain 6411]
MIKNKNFRIQSIASHLRAQSGVIPTDYSGHSSSSYAQTKLRFREPHTRNMVSRLAARSGGVSTGYSEHSSSSCAWTKLRF
VNPRSGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQILRDSLQIIPLSANQGGQLHPALE
IDNQILRFSKAGVTDPLKLGLSPFERIEYRYDADQKKLYRLKYTNLNTSNNEQPLSSTLLSQVDQYQIMVLTPQEITKWP
EVNIDPTKPNELKKLPKGIKIQLTVAGVSYEWIYSLNQSNLSLSPQGGS

Nucleotide

• Length: 870 bp

>NTDB_id=136616 RR32_RS10060 WP_032047939.1 2124760..2125629(-) (xcpW) [Acinetobacter nosocomialis strain 6411]
ATGATAAAAAATAAGAATTTTCGAATTCAAAGCATTGCTTCTCATCTTAGAGCTCAGTCGGGTGTTATTCCGACTGACTA
CTCTGGGCATAGCTCTTCGTCTTACGCTCAGACAAAGCTTCGCTTTAGAGAGCCTCACACTCGAAACATGGTTTCTCGTC
TTGCGGCGCGATCAGGTGGTGTGTCGACTGGCTATTCAGAGCATAGCTCTTCATCTTGCGCTTGGACAAAGCTTCGCTTT
GTTAATCCTCGCTCAGGATTTACGTTGGTTGAATTGTTAGTTGCGATTGCTATCTTTGCGGTCTTATCTTTATTGGGGTG
GAAAATTTTCGATTACTTGCTTAAAGTTCGTGACCGTAATGCTGAACATGAAGTGCATTTGTTTGAGTTACAAGATGCTT
ATCAACAAATTCTTCGTGATAGTCTGCAAATTATTCCTTTATCTGCAAATCAAGGTGGTCAACTTCATCCAGCTTTAGAA
ATTGATAATCAAATTCTGCGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACTAGGTTTATCACCGTTTGAACGAAT
TGAATATCGTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAATAATGAGCAAC
CTTTATCGAGTACCTTGCTAAGTCAGGTTGACCAATATCAGATTATGGTTTTGACTCCGCAAGAGATAACAAAGTGGCCT
GAGGTTAATATTGATCCAACAAAGCCTAACGAATTGAAAAAATTACCGAAAGGAATAAAAATTCAACTTACTGTAGCAGG
AGTAAGTTATGAATGGATCTATAGCTTAAATCAAAGTAATTTATCGCTTTCCCCACAAGGTGGCTCATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (139-268)

• Prokaryotic N-terminal methylation motif (N_methyl) (83-105)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	84.836	84.429	0.716