Detailed information NTG0136575

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: SanJ4211_RS09600
• Genome accession: NZ_CP012805
• Coordinates: 1908367..1909464 (+)
• Length: 365 a.a.
• NCBI ID: WP_003026800.1
• Uniprot ID: -
• Organism: Streptococcus anginosus strain J4211
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1903367..1914464

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SanJ4211_RS09575 (SanJ4211_1908c)	pgsA	1903837..1904376 (-)	540	WP_021002239.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
SanJ4211_RS09580 (SanJ4211_1909c)	rodZ	1904387..1905208 (-)	822	WP_021002240.1	cytoskeleton protein RodZ	-
SanJ4211_RS09585 (SanJ4211_1910c)	yfmH	1905267..1906562 (-)	1296	WP_021002241.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
SanJ4211_RS09590 (SanJ4211_1911c)	yfmF	1906562..1907809 (-)	1248	WP_021002242.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
SanJ4211_RS09595 (SanJ4211_1912)	yaaA	1907985..1908365 (+)	381	WP_003026797.1	S4 domain-containing protein YaaA	-
SanJ4211_RS09600 (SanJ4211_1913)	recF	1908367..1909464 (+)	1098	WP_003026800.1	DNA replication/repair protein RecF	Machinery gene
SanJ4211_RS09605 (SanJ4211_1914c)	guaB	1909553..1911034 (-)	1482	WP_003026802.1	IMP dehydrogenase	-
SanJ4211_RS09610 (SanJ4211_1915c)	trpS	1911166..1912191 (-)	1026	WP_003026805.1	tryptophan--tRNA ligase	-
SanJ4211_RS09615 (SanJ4211_1916c)	galE	1912273..1913268 (-)	996	WP_003026807.1	UDP-glucose 4-epimerase GalE	-
SanJ4211_RS09620 (SanJ4211_1917c)	-	1913288..1913977 (-)	690	WP_003026808.1	triose-phosphate isomerase	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41979.26 Da
• Isoelectric Point: 8.4522

>NTDB_id=136575 SanJ4211_RS09600 WP_003026800.1 1908367..1909464(+) (recF) [Streptococcus anginosus strain J4211]
MWLKNLQIQHFRNYEATEIDFHSGLNIFLGQNAQGKTNILEAIYFLALTRSHRTRSDKDLIYFSKDTLKISGQLVKQTGN
ISLEIDLTPKGRITKVNHLKQSKLSDYVGNMNVVLFAPEDLQLIKGAPALRRKFIDIELGQIKPIYLSDLSHYHHVLKQR
NTYLKTAKTMDETFLAVLDDQLVEFGCRVMQHRIEFLKKLEHFGQQKHLELSSHLENLTIKYCSSVPLSDSNKLKESFQI
ALKQSRSRDLFKKNTGVGPHRDDIAFYINDMNANFGSQGQHRSVVLSLKLAEIELMETVTKEKPILLLDDVMSELDNSRQ
LNLLETISQNIQTFMTTTTLEHLQSMPSNIKIFSIHEGHLTEDKV

Nucleotide

• Length: 1098 bp

>NTDB_id=136575 SanJ4211_RS09600 WP_003026800.1 1908367..1909464(+) (recF) [Streptococcus anginosus strain J4211]
ATGTGGTTAAAAAACTTACAAATTCAACATTTTCGTAATTATGAAGCAACTGAAATAGATTTTCATTCTGGTCTCAATAT
TTTTCTAGGCCAAAACGCTCAAGGAAAAACAAATATCTTGGAAGCTATCTATTTTCTTGCATTGACACGAAGTCATCGAA
CTCGTTCAGACAAAGATTTAATTTATTTCTCCAAAGATACCCTGAAAATATCTGGACAACTTGTCAAACAAACTGGAAAT
ATTTCTTTGGAAATTGACTTGACACCTAAAGGAAGAATTACAAAAGTTAATCATCTAAAACAAAGCAAACTATCTGATTA
TGTTGGAAATATGAATGTTGTTTTATTTGCTCCAGAAGATTTACAGTTGATTAAAGGAGCTCCAGCCCTTAGACGAAAAT
TTATTGATATAGAATTGGGGCAAATTAAACCAATCTATTTATCTGATTTATCACATTACCACCATGTCTTAAAACAAAGA
AATACTTATTTAAAAACAGCAAAAACAATGGATGAGACTTTTTTAGCAGTTTTAGATGATCAACTAGTAGAGTTTGGTTG
TCGTGTTATGCAGCATAGGATAGAATTTCTCAAAAAATTAGAGCACTTTGGTCAACAAAAACATTTGGAACTCTCAAGTC
ATTTAGAAAACTTAACCATTAAGTACTGCTCTTCTGTTCCACTTTCAGATTCCAATAAGTTAAAAGAATCTTTCCAAATT
GCATTAAAGCAAAGCCGTAGTAGAGATTTATTTAAAAAAAATACTGGAGTTGGTCCCCATCGAGATGATATTGCTTTTTA
TATCAATGACATGAATGCCAATTTTGGTAGTCAAGGACAACATCGAAGCGTGGTTTTATCTCTCAAACTGGCAGAAATTG
AGCTCATGGAAACTGTTACTAAAGAAAAACCAATTCTTCTACTTGACGATGTTATGAGTGAACTTGACAATAGTCGTCAA
CTTAATTTACTTGAAACTATTTCTCAAAATATCCAAACATTTATGACAACAACAACTCTAGAACATCTACAAAGCATGCC
TTCTAATATTAAAATTTTCTCAATTCATGAAGGGCATCTAACTGAAGACAAGGTGTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	72.346	98.082	0.71
recF	Bacillus subtilis subsp. subtilis str. 168	47.701	95.342	0.455