Detailed information NTG0136575

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: EHS42_RS15965
• Genome accession: NZ_CP010350
• Coordinates: 3256571..3257935 (+)
• Length: 454 a.a.
• NCBI ID: WP_308469656.1
• Uniprot ID: -
• Organism: Acinetobacter johnsonii XBB1
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 3251571..3262935

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EHS42_RS15945 (RZ95_15790)	thrC	3251777..3252916 (+)	1140	WP_010325699.1	threonine synthase	-
EHS42_RS15950 (RZ95_15795)	-	3253002..3254057 (-)	1056	WP_010325698.1	serine hydrolase	-
EHS42_RS15955 (RZ95_15800)	-	3254273..3254908 (+)	636	WP_010325697.1	response regulator	-
EHS42_RS15960 (RZ95_15805)	pilS	3254930..3256498 (+)	1569	WP_010325696.1	sensor histidine kinase	Regulator
EHS42_RS15965 (RZ95_15810)	pilR	3256571..3257935 (+)	1365	WP_308469656.1	sigma-54 dependent transcriptional regulator	Regulator
EHS42_RS15970 (RZ95_15815)	-	3257940..3259115 (-)	1176	WP_010325694.1	S41 family peptidase	-
EHS42_RS15975 (RZ95_15820)	gpmI	3259134..3260681 (-)	1548	WP_010325693.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
EHS42_RS15980 (RZ95_15825)	lptG	3260805..3261875 (-)	1071	WP_010325692.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 454 a.a.
• Molecular weight: 51129.87 Da
• Isoelectric Point: 6.9738

>NTDB_id=136575 EHS42_RS15965 WP_308469656.1 3256571..3257935(+) (pilR) [Acinetobacter johnsonii XBB1]
MQMSLSRMGIDTRIAYRLQEAVQALKTHQYDACLTDLNLPDGNGLTLVDFIAQNYPNLPVAVLTAYGNMDIAIAALKAGA
FDFVSKPINQKHLEQLLQKAFNQPISHLHIQEDTLEHRLLIGQSLPIQQLRITLKKIARSQAPVFITGESGTGKEVVANL
VHRLSNRNEGPFIAINCGAIPTELMESELFGHRKGSFTGATQDKQGLILSAYGGSLFLDEIAELPLTMQVKLLRAVQEKR
IRPIGSDTEIDVDFRVISASHQDLEALVQQGKFRQDLYFRIHVMDIVLPALRERGNDIILLAQHFIQKICQEWDIPVKPL
SERAREFLLAQYYPGNVRELRNMMERAITLSDESSIDLPHLQTAPLRPIAQTNYANATQQGTIGNDQLSHVPSRKLPEEG
LELYLEKIEKEILMNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDGEDDSV

Nucleotide

• Length: 1365 bp

>NTDB_id=136575 EHS42_RS15965 WP_308469656.1 3256571..3257935(+) (pilR) [Acinetobacter johnsonii XBB1]
ATGCAAATGTCTTTAAGTCGGATGGGGATTGATACACGTATTGCCTATCGCTTACAGGAGGCTGTTCAAGCACTTAAAAC
ACATCAATATGATGCCTGTCTGACAGATTTGAATTTACCTGATGGTAATGGATTAACGCTGGTGGATTTTATTGCTCAAA
ATTATCCTAATCTACCTGTAGCTGTATTAACTGCTTATGGCAACATGGATATTGCGATTGCAGCACTTAAAGCTGGTGCT
TTTGATTTTGTCAGTAAACCGATCAACCAAAAACATTTAGAGCAACTTTTACAAAAAGCCTTTAATCAGCCCATCAGTCA
TCTGCATATCCAAGAAGATACGCTTGAACATCGTCTGCTGATTGGTCAGTCCCTTCCTATTCAACAGCTACGTATCACCT
TAAAGAAAATTGCACGCTCGCAAGCCCCTGTCTTTATTACGGGTGAATCAGGCACTGGCAAAGAAGTGGTGGCTAATCTG
GTACATCGCCTGAGCAATCGCAATGAAGGGCCATTTATTGCCATTAACTGCGGTGCCATACCGACCGAACTGATGGAAAG
TGAATTGTTTGGACACCGTAAAGGCAGCTTCACAGGGGCCACTCAAGACAAACAAGGGCTGATTCTCTCTGCATATGGCG
GCAGTTTATTTTTAGATGAAATTGCCGAGTTACCGCTCACTATGCAGGTGAAACTGCTGCGCGCGGTACAAGAAAAACGC
ATTCGCCCAATTGGGAGTGACACGGAAATTGATGTCGATTTTCGTGTGATTAGTGCCAGCCATCAAGACCTAGAAGCACT
GGTACAACAAGGCAAGTTCCGTCAGGATTTGTACTTCCGCATCCATGTCATGGACATTGTGCTGCCTGCCCTACGTGAGC
GTGGCAATGACATTATTCTTTTAGCACAACATTTCATTCAGAAAATCTGCCAAGAATGGGACATCCCAGTCAAACCACTG
AGTGAACGTGCACGTGAGTTTTTATTGGCCCAATATTATCCAGGCAATGTGCGTGAACTACGCAATATGATGGAACGTGC
CATCACTTTAAGTGATGAAAGCAGTATCGACTTACCACACTTGCAAACAGCACCACTGCGACCGATTGCTCAGACCAACT
ATGCCAATGCCACCCAACAAGGTACTATTGGCAATGATCAACTTAGCCATGTGCCTTCGCGTAAATTGCCCGAAGAGGGT
TTAGAGCTGTATTTAGAAAAAATTGAAAAAGAAATTTTGATGAATGCGCTCAATCTCACCCACTGGAACCGAACACTAGC
GGCTAAAAAGCTCGGCATGTCTTTCCGTTCTTTACGTTATCGCTTGAAGAAATTCGGGCTAGATGGCGAAGACGATTCCG
TTTAG

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (120-286)

• Response regulator receiver domain (Response_reg) (4-97)

• Bacterial regulatory protein, Fis family (HTH_8) (405-445)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	74.229	100	0.742
pilR	Pseudomonas aeruginosa PAK	49.446	99.339	0.491