Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   SanJ4211_RS07800 Genome accession   NZ_CP012805
Coordinates   1544733..1545191 (-) Length   152 a.a.
NCBI ID   WP_003039423.1    Uniprot ID   A0A3Q9F3J3
Organism   Streptococcus anginosus strain J4211     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1539733..1550191
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SanJ4211_RS07780 (SanJ4211_1538c) - 1540382..1540702 (-) 321 WP_021002019.1 PTS cellobiose transporter subunit IIA -
  SanJ4211_RS07785 (SanJ4211_1539c) - 1540713..1541027 (-) 315 WP_021002020.1 PTS cellobiose transporter subunit IIB -
  SanJ4211_RS07790 (SanJ4211_1540c) rcrQ 1541224..1542984 (-) 1761 WP_021002021.1 ABC transporter ATP-binding protein Regulator
  SanJ4211_RS07795 (SanJ4211_1541c) rcrP 1542974..1544740 (-) 1767 WP_021002022.1 ABC transporter ATP-binding protein Regulator
  SanJ4211_RS07800 (SanJ4211_1542c) rcrR 1544733..1545191 (-) 459 WP_003039423.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  SanJ4211_RS07805 (SanJ4211_1543c) - 1545349..1545759 (-) 411 WP_021002023.1 peptide deformylase -
  SanJ4211_RS07810 (SanJ4211_1544c) scrK 1545826..1546725 (-) 900 WP_021002024.1 fructokinase ScrK -
  SanJ4211_RS07815 (SanJ4211_1545c) - 1547005..1548903 (-) 1899 WP_021002025.1 sucrose-specific PTS transporter subunit IIBC -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17895.85 Da        Isoelectric Point: 7.8790

>NTDB_id=136553 SanJ4211_RS07800 WP_003039423.1 1544733..1545191(-) (rcrR) [Streptococcus anginosus strain J4211]
MEKPLLEFKRFGRKTHLMIQKIAKERGIEFMAGPQGQVLHFVNHREDCDKMTFIKDIEQELGITKSVASNLMKRMVKNGL
IYLEVSETDKRAKIIRLTPESKERMNKIRDFFDEMDRCLLTDISEEDLVTFFQVMGKFYQNIEKLEKGETNG

Nucleotide


Download         Length: 459 bp        

>NTDB_id=136553 SanJ4211_RS07800 WP_003039423.1 1544733..1545191(-) (rcrR) [Streptococcus anginosus strain J4211]
ATGGAAAAACCATTATTGGAATTCAAGCGATTTGGGCGAAAAACGCATCTAATGATTCAAAAAATTGCCAAAGAGCGAGG
AATTGAATTTATGGCGGGTCCGCAGGGGCAAGTATTGCATTTTGTGAATCACCGCGAAGACTGTGATAAGATGACCTTTA
TTAAAGATATTGAGCAGGAGTTGGGCATTACTAAGTCCGTTGCCAGTAATTTAATGAAGCGAATGGTGAAGAATGGCTTG
ATTTATCTGGAAGTAAGTGAGACCGATAAACGCGCTAAGATTATTCGTTTAACGCCGGAATCAAAGGAGCGCATGAATAA
AATTCGTGATTTTTTTGATGAAATGGATCGTTGCCTATTGACAGATATTTCAGAAGAAGATTTGGTTACTTTTTTTCAAG
TGATGGGGAAATTTTACCAGAATATTGAAAAATTAGAAAAAGGAGAAACGAATGGTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-92)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3Q9F3J3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

43.836

96.053

0.421