Detailed information    

insolico Bioinformatically predicted

Overview


Name   comD/blpH   Type   Regulator
Locus tag   SanJ4211_RS02905 Genome accession   NZ_CP012805
Coordinates   564823..565734 (-) Length   303 a.a.
NCBI ID   WP_235499515.1    Uniprot ID   -
Organism   Streptococcus anginosus strain J4211     
Function   phosphorylation of ComE; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 559823..570734
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SanJ4211_RS02885 (SanJ4211_0550c) - 560159..560533 (-) 375 WP_037590248.1 hypothetical protein -
  SanJ4211_RS02890 (SanJ4211_0551) comA/nlmT 561014..563164 (+) 2151 WP_003025436.1 peptide cleavage/export ABC transporter Regulator
  SanJ4211_RS02895 (SanJ4211_0552) - 563175..564536 (+) 1362 WP_021001448.1 bacteriocin secretion accessory protein -
  SanJ4211_RS02900 (SanJ4211_0553) - 564629..564778 (+) 150 WP_003025431.1 ComC/BlpC family leader-containing pheromone/bacteriocin -
  SanJ4211_RS02905 (SanJ4211_0554c) comD/blpH 564823..565734 (-) 912 WP_235499515.1 sensor histidine kinase Regulator
  SanJ4211_RS02910 (SanJ4211_0555c) comE/blpR 566135..566881 (-) 747 WP_037590320.1 response regulator transcription factor Regulator
  SanJ4211_RS02915 (SanJ4211_0556c) - 567050..567763 (-) 714 WP_021001450.1 CPBP family intramembrane glutamic endopeptidase -
  SanJ4211_RS02920 (SanJ4211_0557) - 567995..568219 (+) 225 WP_003025424.1 Blp family class II bacteriocin -
  SanJ4211_RS02925 - 568307..568627 (+) 321 WP_003037422.1 hypothetical protein -
  SanJ4211_RS02930 (SanJ4211_0558) - 568635..568868 (+) 234 WP_003025420.1 garvicin Q family class II bacteriocin -
  SanJ4211_RS02935 - 568920..569210 (+) 291 WP_021001453.1 bacteriocin immunity protein -
  SanJ4211_RS02940 (SanJ4211_0559) - 569362..569682 (+) 321 WP_057489587.1 hypothetical protein -
  SanJ4211_RS02945 (SanJ4211_0560) - 569912..570142 (+) 231 WP_021001454.1 Blp family class II bacteriocin -

Sequence


Protein


Download         Length: 303 a.a.        Molecular weight: 34865.12 Da        Isoelectric Point: 6.9327

>NTDB_id=136506 SanJ4211_RS02905 WP_235499515.1 564823..565734(-) (comD/blpH) [Streptococcus anginosus strain J4211]
MRLIQYNFKTLKSQKINHNDKKIIIFVNISMIIYHLIVQVLSYLENENNLQTLNFRESLVVLYLILFVSVANYLDRHLRE
RIQSDLMLQKDLQLKNLENYSHHIEELYTEVRSFRHDYANILTTLKLGIEQNDIGIVKNVYHSVLKDSNKRFRNPKYDIG
RLVHIKNDALKSLLAAKFAQAQEHNVSVSLEVPEDICPQGMELVDFITIVSILCDNAIEAATPTMTIAYVLSENKQVFSI
ENAIKEEHIDMSYIFDAGVSSKGSGRGIGLSNVLAILDRYPNVSLTSASQNYRFQHVLEIHLN

Nucleotide


Download         Length: 912 bp        

>NTDB_id=136506 SanJ4211_RS02905 WP_235499515.1 564823..565734(-) (comD/blpH) [Streptococcus anginosus strain J4211]
TTGCGTTTAATTCAATATAATTTTAAGACATTAAAATCTCAAAAAATTAATCACAACGATAAGAAAATTATCATCTTTGT
AAATATCAGCATGATTATTTATCATCTTATTGTTCAAGTTCTATCTTATTTAGAAAATGAGAATAACTTACAGACACTAA
ATTTTAGAGAAAGTTTAGTAGTTCTTTATCTTATCCTTTTTGTGAGTGTTGCCAATTATTTAGACCGTCATTTACGAGAG
AGAATCCAAAGTGATTTAATGCTTCAAAAAGATTTACAGTTAAAAAACTTGGAAAACTACAGTCATCACATTGAGGAATT
GTACACAGAAGTTCGGAGCTTTCGGCATGATTACGCTAATATTTTAACAACCTTGAAATTAGGAATTGAGCAAAATGATA
TAGGCATTGTAAAGAATGTCTATCATTCTGTTTTGAAAGATTCCAATAAGCGTTTTCGCAATCCCAAGTATGATATTGGA
CGGTTAGTCCATATCAAAAACGATGCCTTAAAAAGCCTGCTAGCTGCTAAATTTGCACAAGCTCAAGAGCATAATGTATC
CGTTTCATTGGAGGTTCCAGAAGATATTTGTCCACAAGGAATGGAATTAGTTGACTTTATCACCATTGTCTCCATTTTGT
GTGATAATGCGATTGAAGCTGCCACTCCAACTATGACGATTGCTTATGTTTTGTCAGAAAACAAGCAGGTATTCTCCATT
GAAAATGCTATAAAAGAAGAGCATATAGACATGTCTTATATTTTTGATGCGGGAGTTAGTTCTAAAGGATCTGGGCGAGG
AATTGGATTATCAAATGTCTTAGCAATTCTGGATCGATATCCAAATGTTTCTCTTACTAGCGCTAGTCAAAATTATCGTT
TCCAGCATGTCCTTGAGATTCATCTGAATTAA

Domains


Predicted by InterProScan.

(201-296)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comD/blpH Streptococcus mutans UA159

44.014

93.729

0.413

  comD/comD3 Streptococcus equinus JB1

37.793

98.68

0.373