Detailed information
Overview
| Name | lytF | Type | Regulator |
| Locus tag | SanJ4211_RS00255 | Genome accession | NZ_CP012805 |
| Coordinates | 39819..41753 (-) | Length | 644 a.a. |
| NCBI ID | WP_057489499.1 | Uniprot ID | - |
| Organism | Streptococcus anginosus strain J4211 | ||
| Function | cell lysis (predicted from homology) Cell lysis |
||
Genomic Context
Location: 34819..46753
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SanJ4211_RS00235 (SanJ4211_0026) | purF | 34891..36354 (+) | 1464 | WP_021001146.1 | amidophosphoribosyltransferase | - |
| SanJ4211_RS00240 (SanJ4211_0027) | purM | 36396..37418 (+) | 1023 | WP_171004455.1 | phosphoribosylformylglycinamidine cyclo-ligase | - |
| SanJ4211_RS00245 (SanJ4211_0028) | purN | 37418..37972 (+) | 555 | WP_021001148.1 | phosphoribosylglycinamide formyltransferase | - |
| SanJ4211_RS00250 (SanJ4211_0029) | purH | 38213..39760 (+) | 1548 | WP_021001149.1 | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase | - |
| SanJ4211_RS00255 (SanJ4211_0030c) | lytF | 39819..41753 (-) | 1935 | WP_057489499.1 | GBS Bsp-like repeat-containing protein | Regulator |
| SanJ4211_RS00260 (SanJ4211_0032) | purD | 41948..43213 (+) | 1266 | WP_021001151.1 | phosphoribosylamine--glycine ligase | - |
| SanJ4211_RS00265 (SanJ4211_0033) | - | 43203..43637 (+) | 435 | WP_003032062.1 | DUF523 domain-containing protein | - |
| SanJ4211_RS00270 (SanJ4211_0035) | purE | 43875..44363 (+) | 489 | WP_021001152.1 | 5-(carboxyamino)imidazole ribonucleotide mutase | - |
| SanJ4211_RS00275 (SanJ4211_0036) | purK | 44350..45438 (+) | 1089 | WP_021001153.1 | 5-(carboxyamino)imidazole ribonucleotide synthase | - |
| SanJ4211_RS00280 (SanJ4211_0037) | - | 45450..45686 (+) | 237 | WP_021001154.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 644 a.a. Molecular weight: 71090.88 Da Isoelectric Point: 8.7216
>NTDB_id=136467 SanJ4211_RS00255 WP_057489499.1 39819..41753(-) (lytF) [Streptococcus anginosus strain J4211]
MKKYSQLFLLSSTILGVFSAQLTAQASEADNAQKSSNPAILASNITVNVSGNTASINYTRSQTQVPYTIYHAVWSDENGQ
DDIKWYSAPQTPTTAIDLRQHTGYGTFHVHTYININGKMVGLNGTTFKVEKPASGTVSTTVLGKTAQISFTRNKDQTNAN
ILHAVWSDEKGQDDIKWYTAGQDTTEIDLSNHKGYGVYHVHTYESKNGKMIGLNGTTFNLEKPNPTIQTSFPEPGIMDIQ
IKNVPKTIYKLTVPAWSDRNGQDDLQWYAATKNPDGSYNVRVELKKHNYDTGTYHIHLYGESYVKPEFTGLAGITAQVDA
DKLPSEEEQKPFFSVENINQEQGTYTVKVSETSKSKPIQSVRVPIWSTSNQSNIKWYAATNHGDGTFTTSFDIRNHQVLS
GTYTNHIYVKYKDGSEHSYATDSVAMSAEKIKTKVSVAKRSTYLYEVTVTDAYGDGKISLPTWSEVNGQDDIQWYTATKA
GNGIYKFTIDTQKHTGSGLFHTHVYRNLNGQMIGLTGTSYQVEKPAISFQPNYAAATTYPKGQCTWGAKALAPWAGNYWG
NGGDWAASARRAGFKTGTTPQVGAIICWTDGGYGHVGVVTHVASNTRIQIQEANYAGKQYIGNFRGWFNPHAAGQGAVSY
IYPK
MKKYSQLFLLSSTILGVFSAQLTAQASEADNAQKSSNPAILASNITVNVSGNTASINYTRSQTQVPYTIYHAVWSDENGQ
DDIKWYSAPQTPTTAIDLRQHTGYGTFHVHTYININGKMVGLNGTTFKVEKPASGTVSTTVLGKTAQISFTRNKDQTNAN
ILHAVWSDEKGQDDIKWYTAGQDTTEIDLSNHKGYGVYHVHTYESKNGKMIGLNGTTFNLEKPNPTIQTSFPEPGIMDIQ
IKNVPKTIYKLTVPAWSDRNGQDDLQWYAATKNPDGSYNVRVELKKHNYDTGTYHIHLYGESYVKPEFTGLAGITAQVDA
DKLPSEEEQKPFFSVENINQEQGTYTVKVSETSKSKPIQSVRVPIWSTSNQSNIKWYAATNHGDGTFTTSFDIRNHQVLS
GTYTNHIYVKYKDGSEHSYATDSVAMSAEKIKTKVSVAKRSTYLYEVTVTDAYGDGKISLPTWSEVNGQDDIQWYTATKA
GNGIYKFTIDTQKHTGSGLFHTHVYRNLNGQMIGLTGTSYQVEKPAISFQPNYAAATTYPKGQCTWGAKALAPWAGNYWG
NGGDWAASARRAGFKTGTTPQVGAIICWTDGGYGHVGVVTHVASNTRIQIQEANYAGKQYIGNFRGWFNPHAAGQGAVSY
IYPK
Nucleotide
Download Length: 1935 bp
>NTDB_id=136467 SanJ4211_RS00255 WP_057489499.1 39819..41753(-) (lytF) [Streptococcus anginosus strain J4211]
ATGAAGAAATACAGTCAATTATTTTTACTATCTAGCACTATTTTGGGCGTTTTTTCTGCTCAACTAACTGCTCAAGCCTC
GGAAGCAGATAATGCTCAAAAAAGCTCAAATCCAGCAATTCTTGCTAGCAACATTACCGTCAATGTTTCTGGAAATACAG
CTTCTATTAACTACACACGCTCACAGACACAAGTTCCTTACACCATTTACCACGCTGTTTGGTCTGATGAAAATGGGCAA
GATGACATTAAGTGGTATTCCGCGCCCCAAACACCAACTACAGCTATTGATTTGCGTCAGCACACTGGTTATGGAACCTT
TCATGTTCACACTTATATCAATATCAATGGAAAAATGGTTGGTTTAAACGGAACGACTTTCAAAGTAGAAAAACCAGCTA
GCGGCACGGTTTCTACAACCGTTTTAGGAAAGACTGCTCAAATATCCTTTACTCGAAACAAAGATCAAACAAATGCCAAT
ATTTTACACGCTGTTTGGTCTGACGAAAAAGGACAAGATGACATCAAGTGGTATACGGCAGGGCAAGACACAACAGAAAT
TGACTTATCCAATCATAAAGGATACGGTGTTTACCATGTTCATACTTATGAAAGTAAAAACGGAAAGATGATTGGATTAA
ATGGCACCACTTTTAACCTTGAAAAACCAAATCCTACTATTCAGACTAGCTTTCCTGAGCCTGGTATCATGGATATTCAG
ATCAAAAATGTTCCTAAAACAATCTACAAACTAACTGTTCCGGCTTGGTCTGACCGCAACGGACAGGATGATCTTCAATG
GTATGCAGCTACTAAAAATCCTGATGGAAGCTACAATGTTAGAGTTGAGCTAAAAAAACACAACTATGACACAGGAACTT
ATCACATTCATCTTTACGGAGAAAGCTATGTCAAACCAGAGTTTACTGGCTTAGCTGGAATAACTGCCCAAGTTGATGCT
GATAAATTGCCTTCTGAAGAAGAGCAAAAACCATTCTTCTCTGTTGAAAATATCAATCAAGAACAAGGGACTTATACCGT
CAAAGTTAGTGAAACTTCAAAGTCCAAACCGATTCAATCTGTCCGAGTACCTATTTGGAGCACGAGCAATCAAAGCAATA
TCAAGTGGTATGCAGCCACTAATCACGGTGATGGAACCTTTACGACAAGCTTTGATATTCGCAATCATCAAGTTTTGTCC
GGAACATACACCAATCATATTTATGTGAAATATAAAGACGGTAGCGAGCATAGTTACGCAACGGATTCGGTTGCTATGTC
CGCAGAAAAAATTAAAACCAAAGTATCTGTCGCTAAACGCTCAACTTATCTTTATGAAGTGACGGTGACAGATGCTTACG
GCGATGGCAAGATCAGCCTACCGACTTGGTCTGAAGTCAATGGACAAGACGATATTCAGTGGTACACTGCTACTAAAGCT
GGAAATGGAATTTACAAATTCACAATTGATACGCAAAAACACACTGGCAGCGGGCTTTTCCATACACATGTCTACCGCAA
TCTCAACGGTCAAATGATTGGACTAACAGGTACGAGCTATCAAGTAGAGAAGCCTGCTATCTCTTTCCAACCAAATTATG
CCGCAGCAACGACTTATCCAAAAGGTCAATGCACTTGGGGCGCCAAAGCTCTTGCGCCTTGGGCTGGCAATTATTGGGGC
AACGGTGGCGACTGGGCTGCTAGTGCCAGACGAGCTGGTTTTAAAACCGGTACAACTCCACAAGTAGGGGCTATTATTTG
TTGGACAGACGGTGGTTACGGTCACGTTGGAGTTGTTACTCACGTTGCCTCAAACACACGCATTCAGATTCAAGAGGCCA
ACTACGCTGGAAAACAATATATTGGCAACTTCCGCGGCTGGTTCAATCCTCATGCAGCTGGACAAGGAGCAGTTAGTTAC
ATTTATCCAAAATAA
ATGAAGAAATACAGTCAATTATTTTTACTATCTAGCACTATTTTGGGCGTTTTTTCTGCTCAACTAACTGCTCAAGCCTC
GGAAGCAGATAATGCTCAAAAAAGCTCAAATCCAGCAATTCTTGCTAGCAACATTACCGTCAATGTTTCTGGAAATACAG
CTTCTATTAACTACACACGCTCACAGACACAAGTTCCTTACACCATTTACCACGCTGTTTGGTCTGATGAAAATGGGCAA
GATGACATTAAGTGGTATTCCGCGCCCCAAACACCAACTACAGCTATTGATTTGCGTCAGCACACTGGTTATGGAACCTT
TCATGTTCACACTTATATCAATATCAATGGAAAAATGGTTGGTTTAAACGGAACGACTTTCAAAGTAGAAAAACCAGCTA
GCGGCACGGTTTCTACAACCGTTTTAGGAAAGACTGCTCAAATATCCTTTACTCGAAACAAAGATCAAACAAATGCCAAT
ATTTTACACGCTGTTTGGTCTGACGAAAAAGGACAAGATGACATCAAGTGGTATACGGCAGGGCAAGACACAACAGAAAT
TGACTTATCCAATCATAAAGGATACGGTGTTTACCATGTTCATACTTATGAAAGTAAAAACGGAAAGATGATTGGATTAA
ATGGCACCACTTTTAACCTTGAAAAACCAAATCCTACTATTCAGACTAGCTTTCCTGAGCCTGGTATCATGGATATTCAG
ATCAAAAATGTTCCTAAAACAATCTACAAACTAACTGTTCCGGCTTGGTCTGACCGCAACGGACAGGATGATCTTCAATG
GTATGCAGCTACTAAAAATCCTGATGGAAGCTACAATGTTAGAGTTGAGCTAAAAAAACACAACTATGACACAGGAACTT
ATCACATTCATCTTTACGGAGAAAGCTATGTCAAACCAGAGTTTACTGGCTTAGCTGGAATAACTGCCCAAGTTGATGCT
GATAAATTGCCTTCTGAAGAAGAGCAAAAACCATTCTTCTCTGTTGAAAATATCAATCAAGAACAAGGGACTTATACCGT
CAAAGTTAGTGAAACTTCAAAGTCCAAACCGATTCAATCTGTCCGAGTACCTATTTGGAGCACGAGCAATCAAAGCAATA
TCAAGTGGTATGCAGCCACTAATCACGGTGATGGAACCTTTACGACAAGCTTTGATATTCGCAATCATCAAGTTTTGTCC
GGAACATACACCAATCATATTTATGTGAAATATAAAGACGGTAGCGAGCATAGTTACGCAACGGATTCGGTTGCTATGTC
CGCAGAAAAAATTAAAACCAAAGTATCTGTCGCTAAACGCTCAACTTATCTTTATGAAGTGACGGTGACAGATGCTTACG
GCGATGGCAAGATCAGCCTACCGACTTGGTCTGAAGTCAATGGACAAGACGATATTCAGTGGTACACTGCTACTAAAGCT
GGAAATGGAATTTACAAATTCACAATTGATACGCAAAAACACACTGGCAGCGGGCTTTTCCATACACATGTCTACCGCAA
TCTCAACGGTCAAATGATTGGACTAACAGGTACGAGCTATCAAGTAGAGAAGCCTGCTATCTCTTTCCAACCAAATTATG
CCGCAGCAACGACTTATCCAAAAGGTCAATGCACTTGGGGCGCCAAAGCTCTTGCGCCTTGGGCTGGCAATTATTGGGGC
AACGGTGGCGACTGGGCTGCTAGTGCCAGACGAGCTGGTTTTAAAACCGGTACAACTCCACAAGTAGGGGCTATTATTTG
TTGGACAGACGGTGGTTACGGTCACGTTGGAGTTGTTACTCACGTTGCCTCAAACACACGCATTCAGATTCAAGAGGCCA
ACTACGCTGGAAAACAATATATTGGCAACTTCCGCGGCTGGTTCAATCCTCATGCAGCTGGACAAGGAGCAGTTAGTTAC
ATTTATCCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lytF | Streptococcus gordonii strain NCTC7865 |
45.785 |
81.056 |
0.371 |
| lytF | Streptococcus gordonii str. Challis substr. CH1 |
44.961 |
80.124 |
0.36 |