Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   GBS85147_RS02030 Genome accession   NZ_CP010319
Coordinates   366649..367374 (+) Length   241 a.a.
NCBI ID   WP_000912307.1    Uniprot ID   A0AAV3JGZ9
Organism   Streptococcus agalactiae strain GBS85147     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 361649..372374
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GBS85147_RS01995 (GBS85147_0404) tsaE 362452..362895 (+) 444 WP_032459127.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  GBS85147_RS02000 (GBS85147_0405) - 362888..363409 (+) 522 WP_017647017.1 GNAT family N-acetyltransferase -
  GBS85147_RS02005 (GBS85147_0406) - 363418..364725 (+) 1308 WP_000708160.1 biofilm formation/cell division transcriptional regulator BrpA -
  GBS85147_RS02010 (GBS85147_0407) - 364789..365085 (-) 297 WP_017647018.1 hypothetical protein -
  GBS85147_RS02015 (GBS85147_0408) - 365082..365501 (-) 420 WP_017647019.1 HIT family protein -
  GBS85147_RS02020 (GBS85147_0409) - 365837..366340 (+) 504 WP_017647020.1 hypothetical protein -
  GBS85147_RS02025 (GBS85147_0410) - 366392..366577 (-) 186 WP_053039121.1 hypothetical protein -
  GBS85147_RS02030 (GBS85147_0411) pptA 366649..367374 (+) 726 WP_000912307.1 ABC transporter ATP-binding protein Regulator
  GBS85147_RS02035 (GBS85147_0412) pptB 367376..368410 (+) 1035 WP_017647021.1 ABC transporter permease Regulator
  GBS85147_RS02040 (GBS85147_0413) ccrZ 368468..369268 (+) 801 WP_000155919.1 cell cycle regulator CcrZ -
  GBS85147_RS02045 (GBS85147_0414) trmB 369258..369893 (+) 636 WP_017647022.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  GBS85147_RS02055 (GBS85147_0416) rimP 370384..370860 (+) 477 WP_047210184.1 ribosome maturation factor RimP -
  GBS85147_RS02060 (GBS85147_0417) nusA 370896..372047 (+) 1152 WP_000032295.1 transcription termination factor NusA -
  GBS85147_RS02065 (GBS85147_0418) rnpM 372069..372365 (+) 297 WP_001140526.1 RNase P modulator RnpM -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26835.26 Da        Isoelectric Point: 4.5704

>NTDB_id=136358 GBS85147_RS02030 WP_000912307.1 366649..367374(+) (pptA) [Streptococcus agalactiae strain GBS85147]
MLKIENVTGGYVNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGILRPYQGDITIDGISLEADQELYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDIATDEVMARAQKLLEMFRLTDKLDWFPMHFSKGMKQKVMIICAFVVSPSLFIVDEPF
LGLDPLAISDLINLLAEEKAKGKSILMSTHVLDSAEKMCDRFVILHKGEIRAVGTLEELRAIFGDSNANLNDIYIALTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=136358 GBS85147_RS02030 WP_000912307.1 366649..367374(+) (pptA) [Streptococcus agalactiae strain GBS85147]
ATGTTAAAAATTGAAAATGTTACAGGGGGGTATGTTAATATCCCAGTTTTAAAAAATATTTCTTTTGAAGTAAATGATGG
AGAGTTAGTTGGATTAATTGGGCTTAATGGTGCAGGAAAATCAACCACTATTAACGAGATTATTGGTATTTTGAGACCCT
ATCAAGGAGATATTACAATTGATGGTATTAGTCTTGAAGCCGACCAAGAACTTTATAGAAAGAAAATAGGCTTTATTCCT
GAAACACCAAGTCTCTATGAGGAACTAACTCTCAGGGAACATTTAGAAACGGTAGCTATGGCGTATGATATTGCCACCGA
TGAAGTTATGGCACGTGCGCAAAAACTATTAGAGATGTTTCGTCTAACAGATAAATTAGACTGGTTTCCAATGCATTTTT
CAAAGGGAATGAAACAAAAGGTTATGATTATTTGTGCTTTTGTTGTATCTCCAAGTTTATTTATTGTTGATGAACCATTT
TTAGGTTTGGATCCACTAGCTATTTCAGATTTGATTAATCTTCTAGCAGAAGAAAAAGCTAAAGGGAAATCTATTTTGAT
GTCAACACACGTATTAGATTCTGCCGAAAAAATGTGTGATCGTTTTGTTATTTTACATAAAGGAGAAATACGGGCAGTTG
GAACCCTAGAGGAATTACGGGCTATTTTTGGAGACAGTAATGCTAATTTAAATGACATCTACATAGCTCTGACAAAAGAG
GTGTGA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

77.824

99.17

0.772

  pptA Streptococcus salivarius strain HSISS4

77.406

99.17

0.768


Multiple sequence alignment