Detailed information
Bioinformatically predicted
Overview
| Name | recU | Type | Machinery gene |
| Locus tag | ACH32_RS00085 | Genome accession | NZ_CP012756 |
| Coordinates | 16706..17332 (+) | Length | 208 a.a. |
| NCBI ID | WP_001108885.1 | Uniprot ID | Q2YY57 |
| Organism | Staphylococcus aureus strain JS395 | ||
| Function | plasmid transformation; homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 11706..22332
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH32_RS00050 (ACH32_00050) | - | 12691..13023 (-) | 333 | WP_000516806.1 | DUF4889 domain-containing protein | - |
| ACH32_RS00055 (ACH32_00055) | - | 13107..14252 (-) | 1146 | WP_000487163.1 | THUMP domain-containing class I SAM-dependent RNA methyltransferase | - |
| ACH32_RS00065 (ACH32_00060) | gpsB | 14903..15247 (-) | 345 | WP_001286320.1 | cell division regulator GpsB | - |
| ACH32_RS00070 (ACH32_00065) | - | 15261..15824 (-) | 564 | WP_000241312.1 | DUF1273 domain-containing protein | - |
| ACH32_RS00075 (ACH32_00070) | - | 15817..16167 (-) | 351 | WP_001000808.1 | YppE family protein | - |
| ACH32_RS00085 (ACH32_00080) | recU | 16706..17332 (+) | 627 | WP_001108885.1 | Holliday junction resolvase RecU | Machinery gene |
| ACH32_RS00090 (ACH32_00085) | - | 17329..19512 (+) | 2184 | WP_000138360.1 | transglycosylase domain-containing protein | - |
| ACH32_RS00095 (ACH32_00090) | - | 20030..20371 (-) | 342 | WP_000182030.1 | YpoC family protein | - |
| ACH32_RS00100 (ACH32_00095) | nth | 20376..21035 (-) | 660 | WP_000253771.1 | endonuclease III | - |
| ACH32_RS00105 (ACH32_00100) | - | 21025..21711 (-) | 687 | WP_000362223.1 | DnaD domain-containing protein | - |
Sequence
Protein
Download Length: 208 a.a. Molecular weight: 24427.81 Da Isoelectric Point: 9.7084
>NTDB_id=136299 ACH32_RS00085 WP_001108885.1 16706..17332(+) (recU) [Staphylococcus aureus strain JS395]
MNYPNGKPYRKNSAIDGGKKTAAFSNIEYGGRGMSLEKDIEHSNAFYLKSDIAVIHKKPTPVQIVNVNYPKRSKAVINEA
YFRTPSTTDYNGVYQGYYIDFEAKETKNKTSFPLNNIHDHQVEHMKNAYQQKGIVFLMIRFKTLDEVYLLPYSKFEIFWK
RYKDNIKKSITVDEIRKNGYHIPYQYQPRLDYLKAVDKLILDESEDRV
MNYPNGKPYRKNSAIDGGKKTAAFSNIEYGGRGMSLEKDIEHSNAFYLKSDIAVIHKKPTPVQIVNVNYPKRSKAVINEA
YFRTPSTTDYNGVYQGYYIDFEAKETKNKTSFPLNNIHDHQVEHMKNAYQQKGIVFLMIRFKTLDEVYLLPYSKFEIFWK
RYKDNIKKSITVDEIRKNGYHIPYQYQPRLDYLKAVDKLILDESEDRV
Nucleotide
Download Length: 627 bp
>NTDB_id=136299 ACH32_RS00085 WP_001108885.1 16706..17332(+) (recU) [Staphylococcus aureus strain JS395]
ATGAATTATCCAAATGGTAAACCATATCGTAAAAATAGTGCTATAGACGGAGGGAAAAAGACCGCTGCCTTTAGTAATAT
TGAGTATGGTGGACGTGGTATGTCACTTGAAAAAGATATCGAACATTCAAATGCGTTTTATCTTAAAAGCGACATTGCAG
TTATTCACAAAAAGCCTACGCCAGTACAAATAGTTAATGTCAACTATCCTAAACGGAGTAAAGCTGTGATTAACGAAGCT
TATTTTCGTACACCTTCAACAACTGATTACAATGGCGTTTATCAAGGTTATTATATTGATTTTGAAGCAAAGGAAACTAA
AAACAAGACGTCCTTTCCTTTAAATAATATTCATGACCATCAAGTCGAACATATGAAAAATGCATATCAACAAAAAGGTA
TTGTGTTTTTAATGATTCGTTTTAAAACGCTAGATGAAGTTTATCTTTTACCCTATTCAAAATTCGAAATATTTTGGAAG
AGATATAAAGATAATATTAAAAAGTCTATAACAGTTGATGAAATACGAAAAAATGGTTACCATATTCCTTATCAGTATCA
ACCAAGATTAGACTATCTAAAAGCAGTTGATAAGTTGATATTAGATGAAAGTGAGGACCGCGTATGA
ATGAATTATCCAAATGGTAAACCATATCGTAAAAATAGTGCTATAGACGGAGGGAAAAAGACCGCTGCCTTTAGTAATAT
TGAGTATGGTGGACGTGGTATGTCACTTGAAAAAGATATCGAACATTCAAATGCGTTTTATCTTAAAAGCGACATTGCAG
TTATTCACAAAAAGCCTACGCCAGTACAAATAGTTAATGTCAACTATCCTAAACGGAGTAAAGCTGTGATTAACGAAGCT
TATTTTCGTACACCTTCAACAACTGATTACAATGGCGTTTATCAAGGTTATTATATTGATTTTGAAGCAAAGGAAACTAA
AAACAAGACGTCCTTTCCTTTAAATAATATTCATGACCATCAAGTCGAACATATGAAAAATGCATATCAACAAAAAGGTA
TTGTGTTTTTAATGATTCGTTTTAAAACGCTAGATGAAGTTTATCTTTTACCCTATTCAAAATTCGAAATATTTTGGAAG
AGATATAAAGATAATATTAAAAAGTCTATAACAGTTGATGAAATACGAAAAAATGGTTACCATATTCCTTATCAGTATCA
ACCAAGATTAGACTATCTAAAAGCAGTTGATAAGTTGATATTAGATGAAAGTGAGGACCGCGTATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recU | Bacillus subtilis subsp. subtilis str. 168 |
53.14 |
99.519 |
0.529 |