Detailed information NTG0136111

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: SanJ4206_RS09730
• Genome accession: NZ_CP012719
• Coordinates: 1984199..1985296 (+)
• Length: 365 a.a.
• NCBI ID: WP_003027889.1
• Uniprot ID: A0ABD7NID5
• Organism: Streptococcus anginosus strain J4206
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1979199..1990296

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SanJ4206_RS09705 (SanJ4206_1893c)	pgsA	1979672..1980211 (-)	540	WP_003027883.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
SanJ4206_RS09710 (SanJ4206_1894c)	rodZ	1980222..1981043 (-)	822	WP_003027884.1	cytoskeleton protein RodZ	-
SanJ4206_RS09715 (SanJ4206_1895c)	yfmH	1981102..1982397 (-)	1296	WP_003027886.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
SanJ4206_RS09720 (SanJ4206_1896c)	yfmF	1982397..1983644 (-)	1248	WP_037582553.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
SanJ4206_RS09725 (SanJ4206_1897)	yaaA	1983820..1984197 (+)	378	WP_003027888.1	S4 domain-containing protein YaaA	-
SanJ4206_RS09730 (SanJ4206_1898)	recF	1984199..1985296 (+)	1098	WP_003027889.1	DNA replication/repair protein RecF	Machinery gene
SanJ4206_RS09735 (SanJ4206_1899c)	guaB	1985385..1986866 (-)	1482	WP_003027890.1	IMP dehydrogenase	-
SanJ4206_RS09740 (SanJ4206_1900c)	trpS	1986996..1988021 (-)	1026	WP_003027891.1	tryptophan--tRNA ligase	-
SanJ4206_RS09745 (SanJ4206_1901c)	galE	1988103..1989098 (-)	996	WP_003027892.1	UDP-glucose 4-epimerase GalE	-
SanJ4206_RS09750 (SanJ4206_1902c)	-	1989119..1989808 (-)	690	WP_003027894.1	triose-phosphate isomerase	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41938.33 Da
• Isoelectric Point: 8.9222

>NTDB_id=136111 SanJ4206_RS09730 WP_003027889.1 1984199..1985296(+) (recF) [Streptococcus anginosus strain J4206]
MWLKKLQIQHFRNYEATEIDFHSGLNIFLGQNAQGKTNILEAIYFLALTRSHRTRSDKDLIYFSKDTLKISGQLVKQTGK
ISLEIDLTPKGRITKVNHLKQSKLSDYVGNMNVILFAPEDLQLIKGAPALRRKFIDIELGQIKPIYLSDLSHYHHVLKQR
NTYLKTAKTIDETFLAVLDDQLVEFGCRVMQHRIEFLKKLEHFGQQKHLELSSHLENLTIKYCSSVPLSDSNKLKESFQI
ALKQSRSRDLFKKNTGVGPHRDDIAFCINDMNANFGSQGQHRSVVLSLKLAEIELMETVTKEKPILLLDDVMSELDNSRQ
LNLLETISQNIQTFMTTTTLEHLQNVPSNIKIFSIHEGHLTEDKV

Nucleotide

• Length: 1098 bp

>NTDB_id=136111 SanJ4206_RS09730 WP_003027889.1 1984199..1985296(+) (recF) [Streptococcus anginosus strain J4206]
ATGTGGTTAAAAAAGTTACAAATTCAACATTTTCGTAATTATGAAGCAACTGAAATAGATTTTCATTCTGGTCTCAATAT
TTTTCTAGGCCAAAATGCTCAAGGAAAAACAAATATCTTGGAAGCCATCTATTTTCTTGCATTGACACGAAGTCATCGAA
CTCGTTCAGACAAAGATTTAATTTATTTCTCCAAAGACACCCTAAAAATATCTGGACAACTTGTCAAGCAAACGGGGAAA
ATCTCTTTAGAGATTGACTTGACACCTAAAGGAAGAATTACAAAGGTTAATCATCTAAAACAAAGCAAACTATCTGATTA
TGTTGGAAATATGAATGTTATTTTATTTGCTCCAGAAGATTTACAGTTGATTAAAGGAGCTCCAGCCCTTAGACGAAAAT
TTATTGATATAGAATTGGGGCAAATTAAGCCAATCTATTTATCTGATTTATCACATTACCACCATGTTTTAAAACAAAGA
AATACTTATTTAAAAACAGCAAAAACAATAGATGAGACTTTTTTAGCAGTTTTAGATGATCAACTAGTGGAATTTGGTTG
TCGTGTTATGCAGCATCGGATAGAATTTCTCAAAAAATTAGAGCACTTTGGTCAACAAAAACATTTGGAACTCTCAAGTC
ATTTAGAAAACTTAACCATTAAGTACTGCTCTTCTGTTCCACTTTCAGATTCCAATAAGTTAAAAGAATCCTTCCAAATT
GCATTAAAGCAAAGCCGTAGTAGAGATTTATTTAAAAAAAATACTGGAGTTGGTCCCCATCGAGATGATATTGCTTTTTG
TATCAATGACATGAATGCCAATTTTGGTAGTCAAGGACAACATCGAAGTGTGGTTTTATCTCTCAAACTGGCAGAAATTG
AGCTCATGGAAACTGTTACTAAAGAAAAACCAATTCTTCTACTTGACGATGTTATGAGTGAACTTGACAATAGTCGTCAA
CTTAATTTACTTGAAACTATTTCTCAAAATATCCAAACATTTATGACAACAACAACTCTAGAACATCTACAAAACGTGCC
TTCTAATATTAAAATTTTCTCAATTCATGAAGGACATTTAACTGAAGATAAGGTGTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: A0ABD7NID5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	72.346	98.082	0.71
recF	Bacillus subtilis subsp. subtilis str. 168	47.414	95.342	0.452