Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Regulator
Locus tag   SanJ4206_RS09795 Genome accession   NZ_CP012719
Coordinates   1998235..1998381 (-) Length   48 a.a.
NCBI ID   WP_003029519.1    Uniprot ID   O33596
Organism   Streptococcus anginosus strain J4206     
Function   binding to ComD; induce autophosphorylation of ComD (predicted from homology)   
Competence regulation

Genomic Context

Location: 1993235..2003381
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SanJ4206_RS09770 (SanJ4206_1906c) - 1994841..1995674 (-) 834 WP_022525263.1 ISL3 family transposase -
  SanJ4206_RS09785 (SanJ4206_1907c) comE 1996143..1996892 (-) 750 WP_157622123.1 competence system response regulator transcription factor ComE Regulator
  SanJ4206_RS09790 (SanJ4206_1908c) comD/comD2 1996892..1998214 (-) 1323 WP_232202911.1 sensor histidine kinase Regulator
  SanJ4206_RS09795 (SanJ4206_1909c) comC 1998235..1998381 (-) 147 WP_003029519.1 bacteriocin Regulator
  SanJ4206_RS09805 (SanJ4206_1910c) rlmH 1998663..1999142 (-) 480 WP_003029518.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SanJ4206_RS09810 (SanJ4206_1911) htrA 1999335..2000525 (+) 1191 WP_003029517.1 S1C family serine protease Regulator
  SanJ4206_RS09815 (SanJ4206_1912) spo0J 2000580..2001347 (+) 768 WP_003029516.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 48 a.a.        Molecular weight: 5620.65 Da        Isoelectric Point: 10.1958

>NTDB_id=136114 SanJ4206_RS09795 WP_003029519.1 1998235..1998381(-) (comC) [Streptococcus anginosus strain J4206]
MKKLFAKKEVVKKEVVEFKELNDEQLDKIIGGDSRIRMGFDFSKLFGK

Nucleotide


Download         Length: 147 bp        

>NTDB_id=136114 SanJ4206_RS09795 WP_003029519.1 1998235..1998381(-) (comC) [Streptococcus anginosus strain J4206]
ATGAAAAAGTTGTTTGCTAAAAAAGAGGTAGTAAAAAAGGAAGTTGTAGAATTTAAAGAACTGAATGATGAGCAGTTAGA
TAAAATCATTGGTGGGGATAGTCGAATCAGAATGGGATTTGATTTTTCAAAACTTTTTGGTAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O33596

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Streptococcus sinensis strain Forsyth1A

51.351

77.083

0.396

Multiple sequence alignment