Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   SanJ4206_RS01560 Genome accession   NZ_CP012719
Coordinates   307912..308958 (+) Length   348 a.a.
NCBI ID   WP_004224306.1    Uniprot ID   A0ABD7NCW2
Organism   Streptococcus anginosus strain J4206     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 302912..313958
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SanJ4206_RS01530 (SanJ4206_0267) tsaE 304285..304725 (+) 441 WP_003033807.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SanJ4206_RS01535 (SanJ4206_0268) - 304718..305239 (+) 522 WP_004224322.1 GNAT family N-acetyltransferase -
  SanJ4206_RS01540 (SanJ4206_0269) brpA 305246..306361 (+) 1116 WP_004224318.1 biofilm formation/cell division transcriptional regulator BrpA -
  SanJ4206_RS01545 (SanJ4206_0270c) - 306408..306695 (-) 288 WP_004224316.1 hypothetical protein -
  SanJ4206_RS01550 (SanJ4206_0271c) - 306705..307115 (-) 411 WP_004224313.1 HIT family protein -
  SanJ4206_RS01555 (SanJ4206_0272) pptA 307184..307915 (+) 732 WP_004224310.1 ABC transporter ATP-binding protein Regulator
  SanJ4206_RS01560 (SanJ4206_0273) pptB 307912..308958 (+) 1047 WP_004224306.1 ABC transporter permease Regulator
  SanJ4206_RS01565 (SanJ4206_0274) ccrZ 309009..309806 (+) 798 WP_004224303.1 cell cycle regulator CcrZ -
  SanJ4206_RS01570 (SanJ4206_0275) trmB 309803..310438 (+) 636 WP_003033795.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SanJ4206_RS01575 (SanJ4206_0276) - 311179..311868 (+) 690 WP_037582627.1 VIT1/CCC1 transporter family protein -
  SanJ4206_RS01580 (SanJ4206_0277) rimP 312116..312604 (+) 489 WP_004224293.1 ribosome maturation factor RimP -
  SanJ4206_RS01585 (SanJ4206_0278) nusA 312658..313851 (+) 1194 WP_003078357.1 transcription termination factor NusA -

Sequence

Protein


Download         Length: 348 a.a.        Molecular weight: 40737.92 Da        Isoelectric Point: 10.3231

>NTDB_id=136032 SanJ4206_RS01560 WP_004224306.1 307912..308958(+) (pptB) [Streptococcus anginosus strain J4206]
MRELFQKRKQVFRNQCLKYSRYVFNDHFVLFLLVFTGFLAVQYSQLLRNLPSNHLPIILALAVLLILLLPLGRIATYMEK
PDSLFLLVKEEELNSYLQEQMRSSYRLWALLQTAILLLAAPLFLALGLPFLGWLILVFLMLLAKWFVFLQKSQKFYQGAG
VNWSYLIAYEERRKQTILRFFALFTNVKGISNSVKRRAYLDGLTNILPKRQSTTWQNMYLRSYLRNGDFLALTIRLLFLS
LLGIGFISQSWIAAIFVALLNYLLLFQLTALYHAFDYQYLTFLFPLEINSKLKGVKQVIVLIGYSVLFVETMMALLFFQD
RVALLFMIGITLLLYVIYLPFKLRSLVD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=136032 SanJ4206_RS01560 WP_004224306.1 307912..308958(+) (pptB) [Streptococcus anginosus strain J4206]
ATGAGAGAACTGTTTCAAAAGCGCAAACAAGTATTTCGCAATCAATGTTTGAAGTATTCGCGCTATGTTTTTAACGACCA
TTTTGTCCTCTTTTTATTAGTTTTTACTGGCTTTTTAGCGGTTCAATACAGTCAGTTGTTGCGAAATTTACCTTCAAATC
ACCTGCCAATCATTCTTGCTTTAGCAGTTCTTTTGATTTTATTGTTGCCTCTGGGACGAATCGCGACATATATGGAAAAA
CCAGATAGTCTATTTTTATTGGTCAAAGAAGAGGAACTAAACAGCTACTTACAAGAACAAATGCGTTCATCTTATCGATT
ATGGGCCTTGCTTCAAACGGCTATTCTATTGCTAGCTGCGCCACTTTTTCTTGCTTTAGGTCTGCCATTTTTGGGATGGC
TTATTCTTGTATTTCTTATGTTGCTAGCAAAATGGTTCGTATTTTTGCAGAAAAGTCAAAAATTTTACCAAGGTGCAGGG
GTGAATTGGAGCTATCTCATTGCTTACGAAGAAAGACGAAAACAGACAATCCTGCGTTTCTTTGCTCTCTTTACCAATGT
TAAGGGAATTTCCAATAGCGTAAAACGCCGAGCATATCTTGATGGTTTGACGAATATTCTACCAAAAAGACAGTCAACTA
CTTGGCAAAATATGTATTTGCGTTCTTATTTGCGCAATGGTGATTTTCTTGCCTTGACTATACGGTTGCTGTTTCTGTCT
CTTTTGGGAATTGGTTTTATCAGTCAATCGTGGATTGCTGCCATATTTGTGGCATTGTTAAATTATCTCCTGCTATTTCA
GTTGACAGCCTTGTACCATGCCTTTGATTACCAATATTTGACGTTCTTATTCCCTTTAGAAATCAACTCAAAGTTAAAAG
GAGTGAAACAAGTGATTGTTCTTATTGGCTACAGCGTGCTTTTTGTGGAAACAATGATGGCTTTGCTGTTTTTCCAAGAT
AGAGTAGCTTTGCTTTTTATGATAGGAATCACATTGCTACTCTATGTCATTTATTTACCATTCAAATTAAGAAGTTTGGT
TGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(3-158)

Bacterial ABC transporter protein EcsB (EcsB)

(160-330)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0ABD7NCW2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

47.414

100

0.474
  pptB Streptococcus salivarius strain HSISS4

46.552

100

0.466