Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGG/cglG   Type   Machinery gene
Locus tag   SanJ4206_RS01085 Genome accession   NZ_CP012719
Coordinates   211912..212238 (+) Length   108 a.a.
NCBI ID   WP_003028477.1    Uniprot ID   A0ABD7ND53
Organism   Streptococcus anginosus strain J4206     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 206912..217238
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SanJ4206_RS01050 (SanJ4206_0172) - 208203..208568 (+) 366 WP_022525291.1 DUF1033 family protein -
  SanJ4206_RS01055 (SanJ4206_0173) comGA 208638..209579 (+) 942 WP_003028470.1 competence type IV pilus ATPase ComGA Machinery gene
  SanJ4206_RS01060 (SanJ4206_0174) comGB 209521..210543 (+) 1023 WP_003028472.1 competence type IV pilus assembly protein ComGB Machinery gene
  SanJ4206_RS01065 (SanJ4206_0175) comGC 210540..210857 (+) 318 WP_003028473.1 competence type IV pilus major pilin ComGC Machinery gene
  SanJ4206_RS01070 (SanJ4206_0176) comGD 210817..211245 (+) 429 WP_037582611.1 competence type IV pilus minor pilin ComGD Machinery gene
  SanJ4206_RS01075 (SanJ4206_0177) comGE/cglE 211217..211510 (+) 294 WP_003028475.1 competence type IV pilus minor pilin ComGE Machinery gene
  SanJ4206_RS01080 (SanJ4206_0178) comGF/cglF 211494..211931 (+) 438 WP_003028476.1 competence type IV pilus minor pilin ComGF Machinery gene
  SanJ4206_RS01085 comGG/cglG 211912..212238 (+) 327 WP_003028477.1 competence type IV pilus minor pilin ComGG Machinery gene
  SanJ4206_RS01090 (SanJ4206_0180) comGH 212306..213259 (+) 954 WP_003028478.1 class I SAM-dependent methyltransferase Machinery gene
  SanJ4206_RS01095 (SanJ4206_0181) - 213306..214505 (+) 1200 WP_003028479.1 acetate kinase -
  SanJ4206_RS01100 (SanJ4206_0182) glmS 214894..216708 (+) 1815 WP_003028480.1 glutamine--fructose-6-phosphate transaminase (isomerizing) -

Sequence

Protein


Download         Length: 108 a.a.        Molecular weight: 12697.74 Da        Isoelectric Point: 10.7447

>NTDB_id=136022 SanJ4206_RS01085 WP_003028477.1 211912..212238(+) (comGG/cglG) [Streptococcus anginosus strain J4206]
MWKQKVKAGIMLYALFIAAVFSLLLQFYLHRQTANHRNFTLNRERTQAYAMALLANENSKQREFDKGHVQDQKGEKELIL
TVTMKSGRRYQFSFPTEKVKQTGKELNK

Nucleotide


Download         Length: 327 bp        

>NTDB_id=136022 SanJ4206_RS01085 WP_003028477.1 211912..212238(+) (comGG/cglG) [Streptococcus anginosus strain J4206]
GTGTGGAAACAGAAAGTTAAAGCGGGCATTATGCTCTATGCCCTCTTTATAGCGGCAGTTTTTAGCTTGCTTTTGCAATT
TTACCTTCATCGTCAAACTGCTAATCACAGGAATTTCACCCTAAACCGAGAACGAACACAGGCTTATGCAATGGCTCTTC
TAGCCAACGAAAATTCTAAGCAAAGAGAATTTGATAAAGGGCATGTCCAAGACCAAAAGGGTGAGAAAGAGCTCATCCTG
ACAGTAACAATGAAGTCTGGTCGCCGTTATCAATTTTCCTTTCCGACTGAAAAAGTAAAGCAGACGGGTAAAGAATTGAA
TAAATGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0ABD7ND53

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG/cglG Streptococcus mitis NCTC 12261

48.039

94.444

0.454
  comGG/cglG Streptococcus mitis SK321

46.078

94.444

0.435
  comGG/cglG Streptococcus pneumoniae Rx1

46.078

94.444

0.435
  comGG/cglG Streptococcus pneumoniae D39

46.078

94.444

0.435
  comGG/cglG Streptococcus pneumoniae R6

46.078

94.444

0.435
  comGG/cglG Streptococcus pneumoniae TIGR4

46.078

94.444

0.435
  comGG Streptococcus mutans UA140

39.796

90.741

0.361
  comGG Streptococcus mutans UA159

39.796

90.741

0.361

Multiple sequence alignment