Detailed information NTG0136009

Bioinformatically predicted

Overview

• Name: lytF
• Type: Regulator
• Locus tag: SanJ4206_RS00270
• Genome accession: NZ_CP012719
• Coordinates: 40943..42877 (-)
• Length: 644 a.a.
• NCBI ID: WP_022525462.1
• Uniprot ID: A0ABD7NBC7
• Organism: Streptococcus anginosus strain J4206
• Function: cell lysis (predicted from homology) Cell lysis

Genomic Context

Location: 35943..47877

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SanJ4206_RS00250 (SanJ4206_0028)	purM	37537..38556 (+)	1020	WP_003028761.1	phosphoribosylformylglycinamidine cyclo-ligase	-
SanJ4206_RS00255 (SanJ4206_0029)	purN	38556..39107 (+)	552	WP_003028762.1	phosphoribosylglycinamide formyltransferase	-
SanJ4206_RS00265 (SanJ4206_0031)	purH	39337..40884 (+)	1548	WP_003028764.1	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	-
SanJ4206_RS00270 (SanJ4206_0032c)	lytF	40943..42877 (-)	1935	WP_022525462.1	GBS Bsp-like repeat-containing protein	Regulator
SanJ4206_RS00275 (SanJ4206_0033)	-	43300..44679 (+)	1380	WP_003028768.1	Eco57I restriction-modification methylase domain-containing protein	-
SanJ4206_RS00280 (SanJ4206_0034)	-	44690..47083 (+)	2394	WP_003028771.1	ATP-binding protein	-
SanJ4206_RS00285 (SanJ4206_0035)	-	47085..47720 (+)	636	WP_022525486.1	hypothetical protein	-

Sequence

Protein

• Length: 644 a.a.
• Molecular weight: 71066.69 Da
• Isoelectric Point: 8.0202

>NTDB_id=136009 SanJ4206_RS00270 WP_022525462.1 40943..42877(-) (lytF) [Streptococcus anginosus strain J4206]
MKKYSQLFLLSSTILGVFSAQLTAQASEADNAQKSSNPATLANNITVNVSGNTASINYTRSQTQVPYTIYHAVWSDENGQ
DDIKWYSAPQTPTTAIDLRQHTGYGTFHVHTYININGKMVGLNGTTFKVEKPASGTVSTTVLGKTAQISFTRNKDQTNAN
ILHAVWSDEKGQDDIKWYTAGQDTTEIDLSNHKGYGVYHVHTYESKNGKMIGLNGTTFNLEKPNPTIQTSFPEPGIMDIQ
IKNVPETIYKLTVPAWSDRNGQDDLQWHAATKNPDGSYNVRVELKKHNYDTGTYHIHLYGESYVKPEFTGLAGITAQVDA
DKLPSEEEQKPFFSVENINQEQGTYTVKVSETSKSKPIQSVRVPIWSTSNQSNIKWYAATNHGDGTFTAAFDIRNHQVLS
GTYTNHIYVKYKDGSEHSYATDSVAMSAEKIKTKVSVNKRSTYLYEVTVTDAYGDGSITLPTWSEVNGQDDIQWYTATKT
GNGIYKFTIDTQKHTGSGLFHTHVYRNLNGQMIGLTGTSYQVEKPAVSFQPNYAAATTYPKGQCTWGAKALAPWAGNYWG
NGGDWAASARRAGFKTGTTPQVGAIICWTDGGYGHVGVVTHVASNTRIQIQEANYAGKQYIGNFRGWFNPHAAGQGAVSY
IYPK

Nucleotide

• Length: 1935 bp

>NTDB_id=136009 SanJ4206_RS00270 WP_022525462.1 40943..42877(-) (lytF) [Streptococcus anginosus strain J4206]
ATGAAGAAATACAGTCAATTATTTTTACTATCTAGCACTATTTTGGGCGTTTTTTCTGCTCAACTAACTGCTCAAGCCTC
GGAAGCAGATAATGCTCAAAAAAGCTCAAATCCAGCAACTCTTGCTAACAACATTACCGTCAATGTTTCTGGAAATACAG
CTTCTATTAACTACACACGCTCACAGACACAAGTTCCTTACACCATTTACCATGCTGTTTGGTCTGATGAAAATGGGCAA
GATGACATTAAGTGGTATTCCGCGCCCCAGACACCAACTACAGCTATTGATTTGCGTCAGCACACTGGTTATGGAACCTT
TCACGTCCACACCTATATCAATATCAATGGAAAAATGGTCGGTTTAAACGGAACGACTTTCAAAGTAGAAAAACCAGCTA
GCGGCACGGTTTCTACAACCGTTTTAGGAAAGACTGCTCAAATATCCTTTACTCGAAACAAAGATCAAACAAATGCCAAT
ATTTTACACGCTGTTTGGTCTGACGAAAAAGGACAAGATGATATCAAGTGGTATACAGCAGGGCAAGACACAACAGAAAT
TGACTTATCCAATCATAAAGGATACGGTGTTTACCATGTTCATACTTATGAAAGTAAAAACGGAAAGATGATTGGATTAA
ATGGCACCACTTTTAACCTTGAAAAACCAAATCCTACTATTCAGACTAGCTTTCCTGAGCCTGGTATCATGGATATTCAG
ATCAAAAATGTTCCTGAAACAATCTACAAACTAACTGTTCCGGCTTGGTCTGACCGCAACGGACAGGATGATCTTCAATG
GCATGCAGCTACTAAAAATCCTGATGGAAGCTACAATGTTAGAGTTGAGCTAAAAAAACACAACTATGACACAGGAACTT
ATCACATTCATCTTTACGGAGAAAGCTATGTCAAACCAGAGTTTACTGGCTTAGCTGGAATCACTGCCCAAGTTGATGCT
GATAAATTGCCTTCTGAAGAAGAGCAAAAACCATTCTTCTCTGTTGAAAATATCAATCAAGAACAAGGGACTTATACCGT
CAAAGTTAGTGAAACTTCAAAGTCCAAACCGATTCAATCTGTCCGAGTACCTATTTGGAGCACGAGCAATCAAAGCAATA
TCAAGTGGTATGCAGCCACTAATCACGGTGACGGAACATTTACGGCAGCATTTGATATTCGCAATCATCAAGTTTTGTCT
GGAACATACACCAATCATATTTATGTAAAATATAAAGACGGTAGCGAGCATAGTTACGCAACGGATTCGGTTGCTATGTC
CGCAGAAAAAATTAAAACCAAAGTATCTGTCAATAAGCGCTCAACTTATCTTTATGAGGTGACAGTGACAGATGCCTACG
GAGACGGATCGATTACCCTACCGACTTGGTCTGAAGTCAACGGGCAAGATGATATCCAGTGGTACACAGCTACTAAAACT
GGAAATGGTATCTACAAGTTCACAATTGATACGCAAAAACACACTGGTAGCGGGCTTTTCCACACACATGTCTACCGCAA
TCTCAACGGTCAAATGATTGGACTAACTGGTACGAGCTATCAAGTAGAGAAACCTGCTGTTTCTTTCCAACCAAATTATG
CCGCAGCAACGACTTATCCAAAAGGGCAATGCACTTGGGGCGCCAAAGCTCTTGCGCCTTGGGCTGGCAATTACTGGGGC
AATGGTGGTGATTGGGCTGCTAGCGCCAGACGAGCTGGTTTTAAAACCGGTACAACTCCACAAGTAGGGGCTATTATTTG
TTGGACAGACGGTGGCTACGGTCATGTTGGAGTTGTTACTCACGTAGCCTCAAACACACGCATTCAGATTCAAGAGGCCA
ACTACGCTGGGAAACAGTATATTGGCAACTTCCGTGGCTGGTTCAATCCTCATGCAGCTGGACAAGGAGCAGTTAGTTAC
ATTTATCCAAAATAA

Domains

Predicted by InterProScan.

• CHAP domain (CHAP) (537-614)

• GBS Bsp-like repeat (GBS_Bsp-like) (335-421)

• GBS Bsp-like repeat (GBS_Bsp-like) (151-218)

• GBS Bsp-like repeat (GBS_Bsp-like) (67-126)

• GBS Bsp-like repeat (GBS_Bsp-like) (437-518)

• GBS Bsp-like repeat (GBS_Bsp-like) (232-302)

3D structure

• AlphaFold DB: A0ABD7NBC7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
lytF	Streptococcus gordonii strain NCTC7865	45.977	81.056	0.373
lytF	Streptococcus gordonii str. Challis substr. CH1	44.961	80.124	0.36