Detailed information
Bioinformatically predicted
Overview
| Name | pilW | Type | Machinery gene |
| Locus tag | AN158_RS07020 | Genome accession | NZ_CP012587 |
| Coordinates | 1528065..1529102 (-) | Length | 345 a.a. |
| NCBI ID | WP_069370499.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain CA-17 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1523065..1534102
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AN158_RS07005 (AN158_07000) | pilY2 | 1523097..1523573 (-) | 477 | WP_031380019.1 | type IV pilin protein | Machinery gene |
| AN158_RS07010 (AN158_07005) | - | 1523587..1527270 (-) | 3684 | WP_069370498.1 | PilC/PilY family type IV pilus protein | - |
| AN158_RS07015 (AN158_07010) | - | 1527286..1528068 (-) | 783 | WP_031963609.1 | pilus assembly PilX family protein | - |
| AN158_RS07020 (AN158_07015) | pilW | 1528065..1529102 (-) | 1038 | WP_069370499.1 | PilW family protein | Machinery gene |
| AN158_RS07025 (AN158_07020) | pilV | 1529104..1529604 (-) | 501 | WP_119813364.1 | type IV pilus modification protein PilV | Machinery gene |
| AN158_RS07030 (AN158_07025) | fimU | 1529601..1530050 (-) | 450 | WP_069370501.1 | GspH/FimT family pseudopilin | Machinery gene |
| AN158_RS17440 | - | 1529956..1530207 (+) | 252 | Protein_1385 | hypothetical protein | - |
| AN158_RS07035 (AN158_07030) | ispH | 1530220..1531170 (-) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| AN158_RS07040 (AN158_07035) | gmk | 1531293..1531922 (+) | 630 | WP_000015937.1 | guanylate kinase | - |
| AN158_RS07045 (AN158_07040) | rpoZ | 1531995..1532273 (+) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| AN158_RS17445 | - | 1532312..1532442 (+) | 131 | Protein_1389 | hypothetical protein | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 37562.57 Da Isoelectric Point: 7.8380
>NTDB_id=134705 AN158_RS07020 WP_069370499.1 1528065..1529102(-) (pilW) [Acinetobacter baumannii strain CA-17]
MKKHQGFTLIELILSLALGLIITAAAILLFLTSQKSLSMQVGVSDLQDNANFGLNYLTQDIRLANLNNPKAIINDQTAYG
GIVLTSAINSAKDAANEPLSNLYKTIIGVTANTNLLSRSQGHSVGSGNAWTGASNVQTNGSDIASDQLVIQYVPQYTIDT
KSTATQADDEYIGGTDCEGNNLNFPLASGRQVIIQRYFLRKDAKNNSDEPNQPLALACDAGYYPLTGNPTAVTRYGDAGE
IIMKRVDYFRVLLNVQGISGRRYISIHDYLNLTAPRPRIVSVQIGLLTRSLQPVGPEIAIKDDQQFSVLDQTITVKKPEN
STKKYVRQVISQTIALRNVIGERGE
MKKHQGFTLIELILSLALGLIITAAAILLFLTSQKSLSMQVGVSDLQDNANFGLNYLTQDIRLANLNNPKAIINDQTAYG
GIVLTSAINSAKDAANEPLSNLYKTIIGVTANTNLLSRSQGHSVGSGNAWTGASNVQTNGSDIASDQLVIQYVPQYTIDT
KSTATQADDEYIGGTDCEGNNLNFPLASGRQVIIQRYFLRKDAKNNSDEPNQPLALACDAGYYPLTGNPTAVTRYGDAGE
IIMKRVDYFRVLLNVQGISGRRYISIHDYLNLTAPRPRIVSVQIGLLTRSLQPVGPEIAIKDDQQFSVLDQTITVKKPEN
STKKYVRQVISQTIALRNVIGERGE
Nucleotide
Download Length: 1038 bp
>NTDB_id=134705 AN158_RS07020 WP_069370499.1 1528065..1529102(-) (pilW) [Acinetobacter baumannii strain CA-17]
ATGAAAAAACATCAAGGTTTTACATTAATCGAGTTAATACTTTCGTTAGCCTTAGGTCTTATAATTACTGCAGCTGCAAT
ATTATTATTTTTGACTAGTCAAAAAAGTTTATCTATGCAGGTCGGAGTATCTGATTTACAAGATAATGCTAATTTTGGAC
TTAACTATTTAACTCAAGATATTCGTCTTGCAAATTTAAATAACCCCAAAGCAATTATTAATGATCAAACTGCTTATGGC
GGTATTGTTCTAACCTCTGCGATTAATTCAGCTAAAGATGCTGCTAATGAACCTCTTAGTAATCTATATAAAACTATTAT
TGGGGTAACTGCTAACACTAATTTACTTTCACGTAGTCAAGGACATAGTGTCGGTAGTGGTAATGCTTGGACGGGAGCGT
CAAACGTCCAAACTAATGGAAGTGATATCGCTAGTGACCAACTCGTTATTCAATATGTACCACAATATACAATTGATACA
AAAAGTACTGCAACTCAAGCTGATGATGAATATATAGGCGGTACAGATTGCGAAGGAAATAATTTGAATTTTCCTCTTGC
TAGTGGGCGACAAGTCATAATCCAACGTTATTTTTTACGTAAAGACGCTAAAAATAATAGTGATGAACCTAACCAACCTT
TAGCTCTTGCTTGTGATGCTGGCTATTACCCATTAACAGGTAACCCAACTGCTGTAACTCGTTATGGGGATGCAGGTGAA
ATTATAATGAAACGTGTGGATTATTTTCGGGTTTTACTAAATGTTCAAGGGATTTCTGGACGACGTTATATTTCAATACA
TGATTATTTGAACTTGACAGCTCCTCGGCCACGTATTGTTTCAGTCCAAATTGGCTTATTAACACGTTCATTGCAACCTG
TAGGTCCAGAAATAGCAATTAAAGATGATCAACAATTTTCTGTATTAGATCAAACTATCACAGTAAAAAAACCTGAAAAT
TCGACAAAAAAATATGTGCGTCAAGTGATATCACAAACCATTGCCTTGCGTAATGTGATCGGGGAGCGTGGTGAATGA
ATGAAAAAACATCAAGGTTTTACATTAATCGAGTTAATACTTTCGTTAGCCTTAGGTCTTATAATTACTGCAGCTGCAAT
ATTATTATTTTTGACTAGTCAAAAAAGTTTATCTATGCAGGTCGGAGTATCTGATTTACAAGATAATGCTAATTTTGGAC
TTAACTATTTAACTCAAGATATTCGTCTTGCAAATTTAAATAACCCCAAAGCAATTATTAATGATCAAACTGCTTATGGC
GGTATTGTTCTAACCTCTGCGATTAATTCAGCTAAAGATGCTGCTAATGAACCTCTTAGTAATCTATATAAAACTATTAT
TGGGGTAACTGCTAACACTAATTTACTTTCACGTAGTCAAGGACATAGTGTCGGTAGTGGTAATGCTTGGACGGGAGCGT
CAAACGTCCAAACTAATGGAAGTGATATCGCTAGTGACCAACTCGTTATTCAATATGTACCACAATATACAATTGATACA
AAAAGTACTGCAACTCAAGCTGATGATGAATATATAGGCGGTACAGATTGCGAAGGAAATAATTTGAATTTTCCTCTTGC
TAGTGGGCGACAAGTCATAATCCAACGTTATTTTTTACGTAAAGACGCTAAAAATAATAGTGATGAACCTAACCAACCTT
TAGCTCTTGCTTGTGATGCTGGCTATTACCCATTAACAGGTAACCCAACTGCTGTAACTCGTTATGGGGATGCAGGTGAA
ATTATAATGAAACGTGTGGATTATTTTCGGGTTTTACTAAATGTTCAAGGGATTTCTGGACGACGTTATATTTCAATACA
TGATTATTTGAACTTGACAGCTCCTCGGCCACGTATTGTTTCAGTCCAAATTGGCTTATTAACACGTTCATTGCAACCTG
TAGGTCCAGAAATAGCAATTAAAGATGATCAACAATTTTCTGTATTAGATCAAACTATCACAGTAAAAAAACCTGAAAAT
TCGACAAAAAAATATGTGCGTCAAGTGATATCACAAACCATTGCCTTGCGTAATGTGATCGGGGAGCGTGGTGAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilW | Acinetobacter baumannii D1279779 |
39.612 |
100 |
0.414 |