Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   NF53_RS05880 Genome accession   NZ_CP010106
Coordinates   1138173..1138349 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus thuringiensis serovar indiana strain HD521     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1133173..1143349
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NF53_RS05860 (NF53_1057) clpC 1133503..1136103 (+) 2601 WP_000365404.1 ATP-dependent chaperone ClpB Regulator
  NF53_RS05865 (NF53_1058) - 1136143..1136325 (-) 183 WP_001211116.1 YjzD family protein -
  NF53_RS05870 (NF53_1059) - 1136482..1137216 (+) 735 WP_000028714.1 hydrolase -
  NF53_RS05875 (NF53_1060) - 1137246..1138118 (+) 873 WP_001986101.1 NAD(P)-dependent oxidoreductase -
  NF53_RS05880 (NF53_1061) comZ 1138173..1138349 (+) 177 WP_001986215.1 ComZ family protein Regulator
  NF53_RS05885 (NF53_1062) fabH 1138570..1139502 (+) 933 WP_001100533.1 beta-ketoacyl-ACP synthase III -
  NF53_RS05890 (NF53_1063) fabF 1139534..1140772 (+) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  NF53_RS05895 (NF53_1064) - 1140879..1141667 (+) 789 WP_000513282.1 DUF2268 domain-containing protein -
  NF53_RS05900 (NF53_1065) - 1141811..1142557 (+) 747 WP_000966128.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=134218 NF53_RS05880 WP_001986215.1 1138173..1138349(+) (comZ) [Bacillus thuringiensis serovar indiana strain HD521]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=134218 NF53_RS05880 WP_001986215.1 1138173..1138349(+) (comZ) [Bacillus thuringiensis serovar indiana strain HD521]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAGGCTTATGAGCTCGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment