Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | NF53_RS00465 | Genome accession | NZ_CP010106 |
| Coordinates | 89488..91923 (+) | Length | 811 a.a. |
| NCBI ID | WP_000971184.1 | Uniprot ID | A0A9X5NCJ1 |
| Organism | Bacillus thuringiensis serovar indiana strain HD521 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 84488..96923
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NF53_RS00450 (NF53_0074) | ctsR | 87216..87677 (+) | 462 | WP_001244565.1 | transcriptional regulator CtsR | - |
| NF53_RS00455 (NF53_0075) | - | 87848..88396 (+) | 549 | WP_000128398.1 | UvrB/UvrC motif-containing protein | - |
| NF53_RS00460 (NF53_0076) | - | 88401..89465 (+) | 1065 | WP_000050842.1 | protein arginine kinase | - |
| NF53_RS00465 (NF53_0077) | clpC | 89488..91923 (+) | 2436 | WP_000971184.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| NF53_RS00470 (NF53_0078) | radA | 92019..93395 (+) | 1377 | WP_001085202.1 | DNA repair protein RadA | Machinery gene |
| NF53_RS00475 (NF53_0079) | disA | 93399..94472 (+) | 1074 | WP_000392158.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| NF53_RS00480 (NF53_0080) | - | 94633..95742 (+) | 1110 | WP_000919677.1 | PIN/TRAM domain-containing protein | - |
| NF53_RS00485 (NF53_0081) | ispD | 95759..96439 (+) | 681 | WP_000288282.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90563.41 Da Isoelectric Point: 6.3584
>NTDB_id=134207 NF53_RS00465 WP_000971184.1 89488..91923(+) (clpC) [Bacillus thuringiensis serovar indiana strain HD521]
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTNAN
TPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLEESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGAEALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVNRLKEQEIELQLTEGAIAAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDVEGE
TFVIHSAEKVK
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTNAN
TPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLEESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGAEALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVNRLKEQEIELQLTEGAIAAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDVEGE
TFVIHSAEKVK
Nucleotide
Download Length: 2436 bp
>NTDB_id=134207 NF53_RS00465 WP_000971184.1 89488..91923(+) (clpC) [Bacillus thuringiensis serovar indiana strain HD521]
ATGATGTTTGGAAGATTTACAGAAAGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCAATTCGCATTGGGCATAA
TAACATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGTGAAGGAATTGCAGCAAAAGCGTTAATTGCTCTTG
GATTGAGCCCGGAGAAAGTGCAAAAAGAGGTAGAAGCGTTAATTGGACGTGGAACAGAAGCTTCTCAAACTGTACATTAT
ACACCTCGTGCTAAAAAAGTTATTGAATTGTCTATGGATGAAGCGCGTAAGCTAGGACATTCTTACGTTGGAACAGAACA
TATTTTACTTGGCTTAATCCGTGAAGGTGAAGGTGTAGCGGCACGTGTTTTAAATAATTTAGGCGTCAGCCTCAACAAAG
CAAGACAACAAGTGTTACAACTTCTTGGAAGTAACGAAGCAAGTTCAGGTCACCAAGGTGGTTCATCGACAAATGCAAAT
ACACCGACACTAGACAGTTTAGCGCGCGACTTAACAGTTGTTGCACGTGAGAATCGTTTGGATCCTGTTATTGGACGTAG
TAAAGAAATTCAACGTGTAATTGAAGTGTTAAGCCGTAGAACAAAAAACAATCCAGTGTTAATTGGAGAGCCTGGTGTAG
GTAAAACAGCAATTGCTGAAGGGTTAGCACAGCAAATCGTAAATAATGAAGTTCCTGAAACGTTAAGAGATAAGCGTGTT
ATGACACTAGATATGGGAACAGTGGTAGCTGGGACGAAATATCGTGGTGAGTTTGAAGATCGTTTAAAGAAAGTAATGGA
TGAAATACGTCAAGCAGGGAATATTATTCTATTTATTGATGAACTTCATACACTAATCGGTGCAGGTGGAGCAGAAGGTG
CAATCGATGCATCAAATATTTTAAAACCATCTTTAGCACGCGGAGAATTACAATGTATTGGTGCGACAACTTTAGATGAG
TATCGTAAATATATTGAAAAGGATGCAGCTTTAGAGAGACGTTTCCAGCCAATTCATGTTGATGAGCCGAGTCTAGAAGA
ATCAACTCAAATCTTGAAAGGTTTACGCGATCGTTATGAGGCCCATCACCGTGTGTCTATTACAGATGATGCAATTGATG
CAGCTGTGAAACTTTCCGATCGTTATATTACGGATCGTTTCTTACCAGATAAAGCAATTGATTTAATTGATGAAGCTGCT
TCAAAGGTTCGCTTACGTTCTTATACAACACCACCAAACTTAAAAGAGCTTGAAGTGAAGCTTGAGGAAATTCGAAAAGA
AAAAGATGCGGCTGTACAAAGTCAAGAGTTTGAAAAGGCTGCTTCCTTACGTGATATGGAACAACGCTTACGTGAGAAAT
TGGAAGATACAAAGCGTCAGTGGAAAGAACAACAAGGAAAAGAAAATTCAGAGGTTACGGTAGAAGATATTGCAAATGTC
GTTTCTACATGGACACGTATCCCTGTTTCTAAACTTGCACAAACAGAGACTGATAAATTATTAAACTTAGAATCCATTCT
TCATGATCGTGTCATCGGCCAGGATGAAGCGGTAGTGGCTGTAGCGAAAGCTGTTCGTCGTGCAAGAGCAGGACTGAAAG
ATCCGAAACGTCCAATTGGTTCATTTATTTTCTTAGGACCAACAGGTGTAGGTAAAACAGAATTAGCAAGAGCGTTAGCA
GAATCTATGTTCGGTGATGAGGATGCAATGATTCGCATTGATATGTCTGAGTATATGGAGAAACATTCAACTTCTCGCTT
AGTTGGTTCTCCTCCAGGATATGTTGGGTATGAAGAAGGCGGACAATTAACAGAGAAGGTTCGTCGTAAGCCGTATTCAG
TTGTCCTATTAGATGAAGTAGAGAAGGCGCATCCTGATGTATTTAATATTTTACTACAGGTATTGGAAGATGGTCGTTTA
ACTGATTCTAAAGGACGTACAGTTGACTTCCGTAATACGATTGTTATAATGACGTCTAACGTTGGTGCTGAGGCGTTAAA
ACGTAACAAACATCTTGGATTTAACGTACAAGATGAAAGCCGTGATTATTCGGATATGAAAGGTAAAGTAATGGATGAGC
TGAAAAAGGCATTTCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTATTCCATATGCTTGAGAAAAAACATATT
CAAGAAATTGTGACTCTTATGGTAAATCAGTTAGTGAATCGCTTAAAAGAACAAGAAATTGAATTGCAATTAACAGAAGG
GGCGATTGCAGCTATTGCTGATAAAGGGTTTGATCGTGAATATGGTGCTCGTCCACTACGTAGAGCAATTCAGAAGCATG
TAGAAGATAGACTATCGGAAGAACTTTTAAAAGGTGCTATTGAGAAAGGACAAAAAGTTATCTTTGATGTAGAAGGGGAA
ACATTTGTCATTCATAGTGCTGAAAAGGTAAAATAA
ATGATGTTTGGAAGATTTACAGAAAGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCAATTCGCATTGGGCATAA
TAACATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGTGAAGGAATTGCAGCAAAAGCGTTAATTGCTCTTG
GATTGAGCCCGGAGAAAGTGCAAAAAGAGGTAGAAGCGTTAATTGGACGTGGAACAGAAGCTTCTCAAACTGTACATTAT
ACACCTCGTGCTAAAAAAGTTATTGAATTGTCTATGGATGAAGCGCGTAAGCTAGGACATTCTTACGTTGGAACAGAACA
TATTTTACTTGGCTTAATCCGTGAAGGTGAAGGTGTAGCGGCACGTGTTTTAAATAATTTAGGCGTCAGCCTCAACAAAG
CAAGACAACAAGTGTTACAACTTCTTGGAAGTAACGAAGCAAGTTCAGGTCACCAAGGTGGTTCATCGACAAATGCAAAT
ACACCGACACTAGACAGTTTAGCGCGCGACTTAACAGTTGTTGCACGTGAGAATCGTTTGGATCCTGTTATTGGACGTAG
TAAAGAAATTCAACGTGTAATTGAAGTGTTAAGCCGTAGAACAAAAAACAATCCAGTGTTAATTGGAGAGCCTGGTGTAG
GTAAAACAGCAATTGCTGAAGGGTTAGCACAGCAAATCGTAAATAATGAAGTTCCTGAAACGTTAAGAGATAAGCGTGTT
ATGACACTAGATATGGGAACAGTGGTAGCTGGGACGAAATATCGTGGTGAGTTTGAAGATCGTTTAAAGAAAGTAATGGA
TGAAATACGTCAAGCAGGGAATATTATTCTATTTATTGATGAACTTCATACACTAATCGGTGCAGGTGGAGCAGAAGGTG
CAATCGATGCATCAAATATTTTAAAACCATCTTTAGCACGCGGAGAATTACAATGTATTGGTGCGACAACTTTAGATGAG
TATCGTAAATATATTGAAAAGGATGCAGCTTTAGAGAGACGTTTCCAGCCAATTCATGTTGATGAGCCGAGTCTAGAAGA
ATCAACTCAAATCTTGAAAGGTTTACGCGATCGTTATGAGGCCCATCACCGTGTGTCTATTACAGATGATGCAATTGATG
CAGCTGTGAAACTTTCCGATCGTTATATTACGGATCGTTTCTTACCAGATAAAGCAATTGATTTAATTGATGAAGCTGCT
TCAAAGGTTCGCTTACGTTCTTATACAACACCACCAAACTTAAAAGAGCTTGAAGTGAAGCTTGAGGAAATTCGAAAAGA
AAAAGATGCGGCTGTACAAAGTCAAGAGTTTGAAAAGGCTGCTTCCTTACGTGATATGGAACAACGCTTACGTGAGAAAT
TGGAAGATACAAAGCGTCAGTGGAAAGAACAACAAGGAAAAGAAAATTCAGAGGTTACGGTAGAAGATATTGCAAATGTC
GTTTCTACATGGACACGTATCCCTGTTTCTAAACTTGCACAAACAGAGACTGATAAATTATTAAACTTAGAATCCATTCT
TCATGATCGTGTCATCGGCCAGGATGAAGCGGTAGTGGCTGTAGCGAAAGCTGTTCGTCGTGCAAGAGCAGGACTGAAAG
ATCCGAAACGTCCAATTGGTTCATTTATTTTCTTAGGACCAACAGGTGTAGGTAAAACAGAATTAGCAAGAGCGTTAGCA
GAATCTATGTTCGGTGATGAGGATGCAATGATTCGCATTGATATGTCTGAGTATATGGAGAAACATTCAACTTCTCGCTT
AGTTGGTTCTCCTCCAGGATATGTTGGGTATGAAGAAGGCGGACAATTAACAGAGAAGGTTCGTCGTAAGCCGTATTCAG
TTGTCCTATTAGATGAAGTAGAGAAGGCGCATCCTGATGTATTTAATATTTTACTACAGGTATTGGAAGATGGTCGTTTA
ACTGATTCTAAAGGACGTACAGTTGACTTCCGTAATACGATTGTTATAATGACGTCTAACGTTGGTGCTGAGGCGTTAAA
ACGTAACAAACATCTTGGATTTAACGTACAAGATGAAAGCCGTGATTATTCGGATATGAAAGGTAAAGTAATGGATGAGC
TGAAAAAGGCATTTCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTATTCCATATGCTTGAGAAAAAACATATT
CAAGAAATTGTGACTCTTATGGTAAATCAGTTAGTGAATCGCTTAAAAGAACAAGAAATTGAATTGCAATTAACAGAAGG
GGCGATTGCAGCTATTGCTGATAAAGGGTTTGATCGTGAATATGGTGCTCGTCCACTACGTAGAGCAATTCAGAAGCATG
TAGAAGATAGACTATCGGAAGAACTTTTAAAAGGTGCTATTGAGAAAGGACAAAAAGTTATCTTTGATGTAGAAGGGGAA
ACATTTGTCATTCATAGTGCTGAAAAGGTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
86.049 |
99.877 |
0.859 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.375 |
98.644 |
0.497 |
| clpC | Streptococcus thermophilus LMD-9 |
45.969 |
100 |
0.471 |
| clpC | Streptococcus mutans UA159 |
45 |
100 |
0.466 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.476 |
100 |
0.465 |
| clpC | Streptococcus pneumoniae D39 |
46.675 |
98.274 |
0.459 |
| clpC | Streptococcus pneumoniae Rx1 |
46.675 |
98.274 |
0.459 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.375 |
98.644 |
0.457 |
| clpE | Streptococcus mutans UA159 |
53.538 |
80.148 |
0.429 |
| clpE | Streptococcus pneumoniae R6 |
52.55 |
79.778 |
0.419 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.55 |
79.778 |
0.419 |
| clpE | Streptococcus pneumoniae Rx1 |
52.55 |
79.778 |
0.419 |
| clpE | Streptococcus pneumoniae D39 |
52.55 |
79.778 |
0.419 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
51.735 |
78.175 |
0.404 |