Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   QR42_RS04095 Genome accession   NZ_CP010075
Coordinates   855240..856031 (+) Length   263 a.a.
NCBI ID   WP_024425808.1    Uniprot ID   A0AAP7QSG5
Organism   Bacillus sp. WP8     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 850240..861031
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QR42_RS04065 (QR42_04065) - 850325..850873 (+) 549 WP_039177253.1 thioredoxin family protein -
  QR42_RS04070 (QR42_04070) - 851207..851674 (+) 468 WP_039177256.1 DUF393 domain-containing protein -
  QR42_RS04075 (QR42_04075) - 851711..852967 (-) 1257 WP_039177258.1 transcriptional regulator -
  QR42_RS04080 (QR42_04080) - 853243..853830 (+) 588 WP_039177261.1 nitroreductase -
  QR42_RS04085 (QR42_04085) - 853869..854024 (-) 156 WP_039177264.1 YfhD family protein -
  QR42_RS18825 - 854086..854196 (-) 111 WP_017358836.1 YfhE family protein -
  QR42_RS04090 (QR42_04090) - 854249..855145 (-) 897 WP_039177266.1 TIGR01777 family oxidoreductase -
  QR42_RS04095 (QR42_04095) recX 855240..856031 (+) 792 WP_024425808.1 recombination regulator RecX Regulator
  QR42_RS04100 (QR42_04100) - 856035..856349 (+) 315 WP_039177269.1 YfhH family protein -
  QR42_RS18830 - 856373..856546 (-) 174 WP_008360604.1 YpzG family protein -
  QR42_RS04105 (QR42_04105) - 856572..856721 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  QR42_RS04110 (QR42_04110) - 856838..857110 (+) 273 WP_024425219.1 YfhJ family protein -
  QR42_RS04115 (QR42_04115) - 857411..858394 (+) 984 WP_024425218.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30635.09 Da        Isoelectric Point: 6.6682

>NTDB_id=134025 QR42_RS04095 WP_024425808.1 855240..856031(+) (recX) [Bacillus sp. WP8]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDSVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPDDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFEIIDKALQEAYDGQEEEKEEEALLYMLEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=134025 QR42_RS04095 WP_024425808.1 855240..856031(+) (recX) [Bacillus sp. WP8]
ATGCCCTATATTACAAAAATTTCTGCTCAGAAAAACAATACAGAGCGGGTCAACATCTTTCTTGATGAAAAGTACGCCTT
TAGCGTTGATTTAGATGTGCTCGTCCAGCACGATTTGAAAAAAGGCAAAGAGCTGGACGAAGCAGATATCATTGAGATTC
AATTCGGTGATTCGGTGAAAAAAGGATTTCAGCAGGCCGTTGATTATTTATCCTACCGTATGAGATCAGTGAAAGAAGTC
ACCGATTATTTAACGAAAAAAGAAATCCCGGCACCTGCTATTAGTGAAATTATACACAAATTAAAGCATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCCTATGTCAGCACCCATCGCAAAACGAACAGCAAAGGACCGTCCGTCCTAAAAAAAG
AATTGAAGCTCAAGGGGATAGACGATGACACGATTGAGCAGGCGCTATCGCAATACCCTGATGACTTACAGCTCGAGGAA
GCTGTAAAGCAGGTTCTCAAGCTTGTCAAAAAAGAAAAAAATCGTTCTGCAAAAGAGATCGAGCAGCGCATCAAGCTGCA
GCTGCAGCGAAAGGGATTTTCGTTTGAGATAATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTCCTTTATATGCTGGAGAAGGCAAAACGCAAGGTAGGGTATGACGGATCATTTGAAAAGAAGATGAAA
GTGAAGCAATTTTTATTCAGAAAAGGCTTTGATCTCGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.878

100

0.639

Multiple sequence alignment