Detailed information NTG0133840

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: QX56_RS02120
• Genome accession: NZ_CP010053
• Coordinates: 428840..429988 (+)
• Length: 382 a.a.
• NCBI ID: WP_003246686.1
• Uniprot ID: A0AAE2V9H5
• Organism: Bacillus subtilis strain PS832
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 423840..434988

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QX56_RS02100 (QX56_02160)	yclH	424217..424897 (-)	681	WP_003234507.1	ABC transporter ATP-binding protein	-
QX56_RS02105 (QX56_02165)	yclI	424913..426373 (-)	1461	WP_003234506.1	ABC transporter permease	-
QX56_RS02110 (QX56_02170)	yclJ	426586..427269 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
QX56_RS02115 (QX56_02175)	yclK	427256..428677 (+)	1422	WP_009969263.1	two-component system sensor histidine kinase YclK	-
QX56_RS02120 (QX56_02180)	rapC	428840..429988 (+)	1149	WP_003246686.1	response regulator aspartate phosphatase RapC	Regulator
QX56_RS02125 (QX56_02185)	phrC	429972..430094 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
QX56_RS21275 (QX56_02190)	yczM	430194..430283 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
QX56_RS21280 (QX56_02195)	yczN	430365..430478 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
QX56_RS02140 (QX56_02200)	thrD	430632..431996 (-)	1365	WP_009966541.1	aspartate kinase	-
QX56_RS02145 (QX56_02205)	ceuB	432381..433331 (+)	951	WP_003234491.1	petrobactin ABC transporter permease YclN	Machinery gene
QX56_RS02150 (QX56_02210)	yclO	433324..434271 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45634.68 Da
• Isoelectric Point: 4.9618

>NTDB_id=133840 QX56_RS02120 WP_003246686.1 428840..429988(+) (rapC) [Bacillus subtilis strain PS832]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYLDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=133840 QX56_RS02120 WP_003246686.1 428840..429988(+) (rapC) [Bacillus subtilis strain PS832]
ATGAAGAGTGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCAGAACAAAAAGCCCAGCTGGTTGGAAGAGCATACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCTGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571