Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   QI18_RS11720 Genome accession   NZ_CP010050
Coordinates   2337772..2339058 (-) Length   428 a.a.
NCBI ID   WP_033900700.1    Uniprot ID   A0A4S2TCP0
Organism   Lactococcus lactis subsp. lactis strain S0 isolate fresh raw milk     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2332772..2344058
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QI18_RS11705 (QI18_11705) - 2333963..2334499 (-) 537 WP_039116464.1 hypothetical protein -
  QI18_RS11710 (QI18_11710) - 2334505..2335836 (-) 1332 WP_039116467.1 FAD/NAD(P)-binding oxidoreductase -
  QI18_RS11715 (QI18_11715) - 2335852..2337702 (-) 1851 WP_003130592.1 proline--tRNA ligase -
  QI18_RS11720 (QI18_11720) eeP 2337772..2339058 (-) 1287 WP_033900700.1 RIP metalloprotease RseP Regulator
  QI18_RS11725 (QI18_11725) - 2339077..2339880 (-) 804 WP_003130590.1 phosphatidate cytidylyltransferase -
  QI18_RS11730 (QI18_11730) - 2339880..2340614 (-) 735 WP_003130589.1 isoprenyl transferase -
  QI18_RS11735 (QI18_11735) yajC 2340988..2341320 (-) 333 WP_003130588.1 preprotein translocase subunit YajC -
  QI18_RS11740 (QI18_11740) - 2341415..2342113 (-) 699 WP_039116470.1 DNA alkylation repair protein -
  QI18_RS11745 (QI18_11745) rlmH 2342132..2342611 (-) 480 WP_003130585.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 46383.91 Da        Isoelectric Point: 6.5147

>NTDB_id=133739 QI18_RS11720 WP_033900700.1 2337772..2339058(-) (eeP) [Lactococcus lactis subsp. lactis strain S0 isolate fresh raw milk]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEVVNPEAENSVSNIVRRINLSEHVELEEAIPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIAPLDVQYQSAGVFHKMLTNFGGPLNNFILGIIAFIVLTFVQGGVPSTTNAIGQVEKGTPAYNAGLKAGDKIEAV
NGTKTADWNNVVTEISGSKGKELKLEVSRSGKSETLSVTPKKMDGSYRVGIMQSMKTGFFDKITGGFVQAGQSATAIFKA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGLPTIINLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSQEKES
IITMVGVVFMLVLFVAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=133739 QI18_RS11720 WP_033900700.1 2337772..2339058(-) (eeP) [Lactococcus lactis subsp. lactis strain S0 isolate fresh raw milk]
TTGATAGAAACACTGATTACTTTTATTATTATCTTTGGTATTATTGTCGCTATCCATGAATATGGCCATCTTTGGTGGGC
AAAACGTTCAGGAATTTTAGTGCGTGAATATGCCGTTGGAATGGGCCCGAAAATTTTTGCTCACCAAGCAAAAGATGGGA
CACTTTACACGATAAGAATTCTTCCACTCGGTGGCTATGTTCGTTTGGCTGGTTGGGGTGATGACAAGACTGAAATCAAA
AAAGGACAAGCTGCAAGTCTTGTTGTCAGTAAATCTGAAGTAGTAAATCCAGAAGCTGAAAATTCTGTCAGTAATATCGT
CAGAAGAATTAATCTGTCAGAACATGTTGAATTAGAAGAAGCAATTCCAATGTTGATTACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTTTTTGGGGAAATCAAACGTTATTCTGTTGATCATGATGCAACAATCATTGAAGAAGAT
GGAACAGAAGTTCGGATTGCACCACTCGATGTTCAATATCAATCAGCCGGTGTCTTTCATAAAATGTTGACAAACTTCGG
TGGTCCTTTGAATAACTTTATTTTAGGAATAATCGCTTTTATCGTTCTAACCTTTGTTCAAGGAGGCGTTCCTTCAACTA
CTAATGCTATTGGCCAAGTTGAAAAAGGAACACCCGCTTACAATGCAGGCTTAAAAGCTGGTGATAAAATTGAAGCAGTC
AATGGAACTAAAACGGCAGATTGGAACAATGTTGTTACTGAAATTTCAGGTTCTAAAGGAAAAGAATTAAAACTTGAAGT
TAGCCGTTCAGGCAAATCGGAAACCTTATCAGTTACACCTAAAAAAATGGACGGAAGTTACCGTGTTGGCATTATGCAAT
CAATGAAAACAGGTTTCTTTGATAAGATTACAGGTGGCTTTGTTCAAGCAGGCCAATCAGCTACAGCAATCTTTAAAGCT
TTAGGAAGTTTGATTGCACGACCGAGTCTTGATAAACTTGGTGGTCCAGTTGCTATTTATCAACTCAGTGGCCAAGCCGC
GAGAGCAGGTTTGCCGACGATTATTAATCTTTTAGCTATGCTTTCAATTAATTTAGGGATTGTCAATCTTTTTCCTATTC
CAGTACTTGATGGTGGAAAAATTGTCCTAAATATTATTGAAGCAATTCGTGGCAAAGCACTCTCACAAGAAAAGGAATCA
ATCATCACAATGGTAGGAGTTGTCTTCATGCTTGTGCTCTTTGTAGCAGTAACATGGAATGATATTCTCCGAGCCTTTGT
AAATTAA

Domains


Predicted by InterproScan.

(7-413)

(218-269)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4S2TCP0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.845

100

0.572

  eeP Streptococcus thermophilus LMD-9

56.613

100

0.57


Multiple sequence alignment