Detailed information NTG0133591

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: QF06_RS16135
• Genome accession: NZ_CP010014
• Coordinates: 3268487..3269644 (-)
• Length: 385 a.a.
• NCBI ID: WP_003227983.1
• Uniprot ID: A0A199WDV9
• Organism: Bacillus sp. YP1
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3263487..3274644

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QF06_RS16105 (QF06_16110)	-	3263740..3264159 (-)	420	WP_003227995.1	TIGR03826 family flagellar region protein	-
QF06_RS16110 (QF06_16115)	comFC	3264233..3264955 (-)	723	WP_014481051.1	comF operon protein ComFC	Machinery gene
QF06_RS16115 (QF06_16120)	comFB	3264919..3265215 (-)	297	WP_003227989.1	late competence protein ComFB	-
QF06_RS16120 (QF06_16125)	comFA	3265275..3266666 (-)	1392	WP_041850475.1	ATP-dependent helicase ComFA	Machinery gene
QF06_RS16125 (QF06_16130)	-	3266772..3267617 (-)	846	WP_003227986.1	DegV family protein	-
QF06_RS16130 (QF06_16135)	degU	3267715..3268404 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
QF06_RS16135 (QF06_16140)	degS	3268487..3269644 (-)	1158	WP_003227983.1	two-component sensor histidine kinase DegS	Regulator
QF06_RS16140 (QF06_16145)	-	3269861..3270514 (+)	654	WP_003227979.1	YigZ family protein	-
QF06_RS16145 (QF06_16150)	tagV	3270514..3271698 (+)	1185	WP_041850474.1	polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV	-
QF06_RS16150 (QF06_16155)	-	3271771..3272847 (-)	1077	WP_003227975.1	MraY family glycosyltransferase	-
QF06_RS16155 (QF06_16160)	-	3272992..3274185 (-)	1194	WP_080332566.1	glycosyltransferase family 1 protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44957.76 Da
• Isoelectric Point: 6.2957

>NTDB_id=133591 QF06_RS16135 WP_003227983.1 3268487..3269644(-) (degS) [Bacillus sp. YP1]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=133591 QF06_RS16135 WP_003227983.1 3268487..3269644(-) (degS) [Bacillus sp. YP1]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAAGTTTTTCAAATCGGTGAGCAGTCACGCCAGCAGTATGAACAGCTGGTTGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATCGAGCTTGGCGATAAACTTGAAGTGCAAACCCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCAGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTACGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

3D structure

• AlphaFold DB: A0A199WDV9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	100	100	1