Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   BF28_RS10110 Genome accession   NZ_CP009968
Coordinates   1411261..1412055 (+) Length   264 a.a.
NCBI ID   WP_003161566.1    Uniprot ID   P52928
Organism   Bacillus cereus E33L     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1406261..1417055
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BF28_RS10095 (BF28_1500) argR 1407100..1407549 (+) 450 WP_001032581.1 arginine repressor ArgR -
  BF28_RS10100 (BF28_1501) recN 1407817..1409556 (+) 1740 WP_000947757.1 DNA repair protein RecN Machinery gene
  BF28_RS10105 (BF28_1502) spoIVB 1409675..1410973 (+) 1299 WP_002054681.1 SpoIVB peptidase -
  BF28_RS10110 (BF28_1503) spo0A 1411261..1412055 (+) 795 WP_003161566.1 sporulation transcription factor Spo0A Regulator
  BF28_RS31180 (BF28_1504) - 1412632..1413927 (+) 1296 WP_000192127.1 WXG100 family type VII secretion target -
  BF28_RS10125 (BF28_1505) - 1413911..1414525 (+) 615 WP_000849726.1 hypothetical protein -
  BF28_RS31185 - 1414618..1414716 (+) 99 Protein_1438 sporulation initiation factor Spo0A C-terminal domain-containing protein -
  BF28_RS10130 (BF28_1506) - 1415014..1416540 (+) 1527 WP_000218391.1 glycosyltransferase family 39 protein -
  BF28_RS10135 (BF28_1507) - 1416708..1416854 (-) 147 WP_001247671.1 YycC family protein -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29440.17 Da        Isoelectric Point: 7.4718

>NTDB_id=133229 BF28_RS10110 WP_003161566.1 1411261..1412055(+) (spo0A) [Bacillus cereus E33L]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=133229 BF28_RS10110 WP_003161566.1 1411261..1412055(+) (spo0A) [Bacillus cereus E33L]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTCG
TATTGGATATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTAGACTTAGGTGCTTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAGGCGAACGCTACTATTAAACGTCCAC
TGCCATCTTTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAATTTAGACGCGAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTACATGTACTTAAGGGAAGCAATTTCTATGGTGTACAATGACATCGAATTACT
TGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGCCGCGTTGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCCGAGTTTATTGCAATGGTTGCGGATAAGCTTAGACTTGAACATAAGGCTTCGTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P52928

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818

Multiple sequence alignment