Detailed information    

insolico Bioinformatically predicted

Overview


Name   sinI   Type   Regulator
Locus tag   OY17_RS14735 Genome accession   NZ_CP009938
Coordinates   3071551..3071724 (+) Length   57 a.a.
NCBI ID   WP_014418369.1    Uniprot ID   I2C7P2
Organism   Bacillus sp. BH072 isolate honey     
Function   inhibit the expression of sinR (predicted from homology)   
Competence regulation

Genomic Context


Location: 3066551..3076724
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OY17_RS14720 (OY17_14720) gcvT 3067364..3068464 (-) 1101 WP_014418366.1 glycine cleavage system aminomethyltransferase GcvT -
  OY17_RS14725 (OY17_14725) - 3068888..3070558 (+) 1671 WP_021494309.1 SNF2-related protein -
  OY17_RS14730 (OY17_14730) - 3070580..3071374 (+) 795 WP_014418368.1 YqhG family protein -
  OY17_RS14735 (OY17_14735) sinI 3071551..3071724 (+) 174 WP_014418369.1 anti-repressor SinI family protein Regulator
  OY17_RS14740 (OY17_14740) sinR 3071758..3072093 (+) 336 WP_003153104.1 transcriptional regulator SinR Regulator
  OY17_RS14745 (OY17_14745) - 3072141..3072926 (-) 786 WP_007408329.1 TasA family protein -
  OY17_RS14750 (OY17_14750) - 3072991..3073575 (-) 585 WP_014418370.1 signal peptidase I -
  OY17_RS14755 (OY17_14755) tapA 3073547..3074218 (-) 672 WP_014418371.1 amyloid fiber anchoring/assembly protein TapA -
  OY17_RS14760 (OY17_14760) - 3074477..3074806 (+) 330 WP_014418372.1 DUF3889 domain-containing protein -
  OY17_RS14765 (OY17_14765) - 3074847..3075026 (-) 180 WP_003153093.1 YqzE family protein -
  OY17_RS14770 (OY17_14770) comGG 3075083..3075460 (-) 378 WP_014418373.1 competence type IV pilus minor pilin ComGG Machinery gene
  OY17_RS14775 (OY17_14775) comGF 3075461..3075856 (-) 396 WP_014721501.1 competence type IV pilus minor pilin ComGF -
  OY17_RS14780 (OY17_14780) comGE 3075870..3076184 (-) 315 WP_032863566.1 competence type IV pilus minor pilin ComGE Machinery gene
  OY17_RS14785 (OY17_14785) comGD 3076168..3076605 (-) 438 WP_007612572.1 competence type IV pilus minor pilin ComGD Machinery gene

Sequence


Protein


Download         Length: 57 a.a.        Molecular weight: 6642.60 Da        Isoelectric Point: 9.8168

>NTDB_id=133155 OY17_RS14735 WP_014418369.1 3071551..3071724(+) (sinI) [Bacillus sp. BH072 isolate honey]
MKNAKTEFSQLDKEWVELILEAQKANISLEEIRKYLLSNKKSSQHIQAARSHTVNPF

Nucleotide


Download         Length: 174 bp        

>NTDB_id=133155 OY17_RS14735 WP_014418369.1 3071551..3071724(+) (sinI) [Bacillus sp. BH072 isolate honey]
ATGAAAAATGCAAAAACAGAATTTTCGCAATTAGATAAGGAATGGGTTGAGCTGATATTAGAAGCCCAAAAAGCAAATAT
CAGCCTAGAAGAAATACGCAAATACCTGCTTTCGAATAAAAAGTCTTCTCAACATATCCAGGCAGCCAGAAGTCATACCG
TAAATCCTTTCTGA

Domains


Predicted by InterproScan.

(11-37)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB I2C7P2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sinI Bacillus subtilis subsp. subtilis str. 168

71.93

100

0.719


Multiple sequence alignment