Detailed information NTG0133125

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: OY17_RS04655
• Genome accession: NZ_CP009938
• Coordinates: 938571..939719 (+)
• Length: 382 a.a.
• NCBI ID: WP_014304340.1
• Uniprot ID: I2C1C2
• Organism: Bacillus sp. BH072 isolate honey
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 933571..944719

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OY17_RS04635 (OY17_04635)	-	933971..934654 (-)	684	WP_014416899.1	ABC transporter ATP-binding protein	-
OY17_RS04640 (OY17_04640)	-	934669..936102 (-)	1434	WP_014416900.1	ABC transporter permease	-
OY17_RS04645 (OY17_04645)	-	936315..936998 (+)	684	WP_014416901.1	response regulator transcription factor	-
OY17_RS04650 (OY17_04650)	-	936985..938412 (+)	1428	WP_088056326.1	HAMP domain-containing sensor histidine kinase	-
OY17_RS04655 (OY17_04655)	rapC	938571..939719 (+)	1149	WP_014304340.1	Rap family tetratricopeptide repeat protein	Regulator
OY17_RS04660 (OY17_04660)	phrC	939703..939822 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
OY17_RS19840 (OY17_04665)	-	939973..940068 (-)	96	WP_021495118.1	YjcZ family sporulation protein	-
OY17_RS04670 (OY17_04670)	-	940163..941527 (-)	1365	WP_014416903.1	aspartate kinase	-
OY17_RS04675 (OY17_04675)	ceuB	941941..942894 (+)	954	WP_014416904.1	ABC transporter permease	Machinery gene
OY17_RS04680 (OY17_04680)	-	942884..943831 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
OY17_RS04685 (OY17_04685)	-	943825..944583 (+)	759	WP_012116804.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45494.75 Da
• Isoelectric Point: 4.9939

>NTDB_id=133125 OY17_RS04655 WP_014304340.1 938571..939719(+) (rapC) [Bacillus sp. BH072 isolate honey]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=133125 OY17_RS04655 WP_014304340.1 938571..939719(+) (rapC) [Bacillus sp. BH072 isolate honey]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAAGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATATACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

3D structure

• AlphaFold DB: I2C1C2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.199	100	0.822
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568