Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE0566   Type   Regulator
Locus tag   AEI09_RS03465 Genome accession   NZ_CP012248
Coordinates   647280..647933 (-) Length   217 a.a.
NCBI ID   WP_087693356.1    Uniprot ID   -
Organism   Campylobacter jejuni strain CJ514CC45     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 642280..652933
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI09_RS03430 (AEI09_03445) - 643134..643988 (-) 855 WP_059118349.1 lambda-exonuclease family protein -
  AEI09_RS03435 (AEI09_03450) - 643990..644217 (-) 228 WP_002874355.1 helix-turn-helix domain-containing protein -
  AEI09_RS03440 (AEI09_03455) - 644208..644465 (-) 258 WP_002865124.1 hypothetical protein -
  AEI09_RS03445 (AEI09_03460) - 644456..644725 (-) 270 WP_002874357.1 hypothetical protein -
  AEI09_RS03450 (AEI09_03465) - 645285..645557 (-) 273 WP_052805323.1 hypothetical protein -
  AEI09_RS03455 (AEI09_03470) - 645701..646432 (+) 732 WP_002861653.1 hypothetical protein -
  AEI09_RS03460 (AEI09_03475) - 646466..647293 (-) 828 WP_052805324.1 hypothetical protein -
  AEI09_RS03465 (AEI09_03480) CJE0566 647280..647933 (-) 654 WP_087693356.1 DNA/RNA non-specific endonuclease Regulator
  AEI09_RS03470 (AEI09_03485) - 647977..648249 (-) 273 WP_002795981.1 hypothetical protein -
  AEI09_RS03475 (AEI09_03490) - 648230..649126 (-) 897 WP_002874367.1 hypothetical protein -
  AEI09_RS03480 (AEI09_03495) - 649166..649900 (-) 735 WP_002874368.1 helix-turn-helix transcriptional regulator -
  AEI09_RS03485 (AEI09_03500) - 650012..650230 (+) 219 WP_002826741.1 hypothetical protein -
  AEI09_RS03490 (AEI09_03505) - 650227..650697 (+) 471 WP_087693358.1 hypothetical protein -
  AEI09_RS03495 (AEI09_03510) - 650657..651034 (+) 378 WP_087693360.1 hypothetical protein -
  AEI09_RS03500 (AEI09_03515) - 651031..652032 (+) 1002 WP_087693362.1 hypothetical protein -
  AEI09_RS03505 (AEI09_03520) - 652042..652689 (+) 648 WP_052798608.1 hypothetical protein -

Sequence

Protein


Download         Length: 217 a.a.        Molecular weight: 25585.12 Da        Isoelectric Point: 9.9170

>NTDB_id=133004 AEI09_RS03465 WP_087693356.1 647280..647933(-) (CJE0566) [Campylobacter jejuni strain CJ514CC45]
MKKLIILPLLSTLALADYTQYKPSEDFAKYFTKQNCSQVLDKFYYLNCYDYNYKGTRAVAYRLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDNNPQRIRNQIAIPSSYTKILKGENFKECYQVPNHEVEDESIKKYKVNCGKF

Nucleotide


Download         Length: 654 bp        

>NTDB_id=133004 AEI09_RS03465 WP_087693356.1 647280..647933(-) (CJE0566) [Campylobacter jejuni strain CJ514CC45]
ATGAAAAAACTTATAATCTTACCATTGTTATCCACTCTAGCCTTAGCTGATTATACACAATACAAACCAAGTGAAGATTT
TGCTAAGTATTTTACTAAGCAAAACTGCTCACAAGTTTTAGATAAATTCTATTATCTAAATTGCTATGATTATAATTATA
AAGGCACTAGAGCCGTAGCTTATAGATTAGAAGCGGATAATTTAAAAGGTGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACTACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCACACTCT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCGCAAAATCCAC
AGATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGATAATAATCCACAAAGAATAAGAAATCAAATTGCCATTCCAAGCTCTTACACTAAGATTTTAAA
AGGCGAGAATTTTAAAGAATGTTACCAAGTACCAAATCATGAAGTTGAAGATGAGAGTATAAAAAAATATAAGGTTAATT
GTGGCAAATTTTAA

Domains

Predicted by InterProScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(27-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE0566 Campylobacter jejuni RM1221

92.627

100

0.926
  CJE1441 Campylobacter jejuni RM1221

91.705

100

0.917

Multiple sequence alignment