Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE0566   Type   Regulator
Locus tag   AEI14_RS02375 Genome accession   NZ_CP012241
Coordinates   425983..426645 (-) Length   220 a.a.
NCBI ID   WP_002929397.1    Uniprot ID   -
Organism   Campylobacter jejuni strain CJ065CC48     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 420983..431645
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI14_RS02325 (AEI14_02340) - 421643..422386 (-) 744 WP_004314296.1 phage regulatory protein/antirepressor Ant -
  AEI14_RS02330 (AEI14_02345) - 422383..422565 (-) 183 WP_002795990.1 hypothetical protein -
  AEI14_RS02335 (AEI14_02350) - 422708..422905 (+) 198 WP_002810107.1 hypothetical protein -
  AEI14_RS02340 - 422898..423050 (-) 153 WP_002871210.1 hypothetical protein -
  AEI14_RS02345 (AEI14_02355) - 423047..423301 (-) 255 WP_002795984.1 hypothetical protein -
  AEI14_RS02350 (AEI14_02360) - 423292..423561 (-) 270 WP_002875049.1 hypothetical protein -
  AEI14_RS02355 (AEI14_02365) - 423919..424191 (-) 273 WP_002875050.1 hypothetical protein -
  AEI14_RS02360 (AEI14_02370) - 424370..425140 (+) 771 WP_002929394.1 SEL1-like repeat protein -
  AEI14_RS02365 (AEI14_02375) - 425152..425427 (-) 276 WP_002840259.1 hypothetical protein -
  AEI14_RS02370 (AEI14_02380) - 425414..425917 (-) 504 WP_002923453.1 Panacea domain-containing protein -
  AEI14_RS02375 (AEI14_02385) CJE0566 425983..426645 (-) 663 WP_002929397.1 DNA/RNA non-specific endonuclease Regulator
  AEI14_RS02380 (AEI14_02390) - 426665..427438 (-) 774 WP_002929400.1 hypothetical protein -
  AEI14_RS02385 (AEI14_02395) - 427435..428166 (-) 732 WP_002929403.1 helix-turn-helix transcriptional regulator -
  AEI14_RS02390 (AEI14_02400) - 428307..428522 (+) 216 WP_002925661.1 hypothetical protein -
  AEI14_RS02395 (AEI14_02405) - 428675..429040 (-) 366 WP_002874369.1 hypothetical protein -
  AEI14_RS02400 (AEI14_02410) - 429083..430084 (+) 1002 WP_002929405.1 hypothetical protein -
  AEI14_RS02405 (AEI14_02415) - 430095..430745 (+) 651 WP_002924555.1 hypothetical protein -
  AEI14_RS02410 (AEI14_02420) - 430763..431143 (+) 381 WP_002865488.1 hypothetical protein -
  AEI14_RS02415 (AEI14_02425) - 431143..431529 (+) 387 WP_002861661.1 terminase small subunit -

Sequence

Protein


Download         Length: 220 a.a.        Molecular weight: 25816.32 Da        Isoelectric Point: 9.9096

>NTDB_id=132813 AEI14_RS02375 WP_002929397.1 425983..426645(-) (CJE0566) [Campylobacter jejuni strain CJ065CC48]
MKKLILLPLLSTLAFADYTQYKPSEDFAKYFTKQNCSQVLDKFYYLNCYDYNYKGTKAVAYKLEAENLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVASKLGSLEVL
NLVNYDNNPQRIRNQIAIPSSYTKILKGENFKECYQVPNHKVENENIKNYKVNCDILTGS

Nucleotide


Download         Length: 663 bp        

>NTDB_id=132813 AEI14_RS02375 WP_002929397.1 425983..426645(-) (CJE0566) [Campylobacter jejuni strain CJ065CC48]
GTGAAAAAACTCATACTTTTGCCATTGTTATCCACTCTAGCTTTTGCTGATTACACACAATATAAACCGAGTGAAGATTT
TGCAAAGTATTTTACTAAACAAAACTGCTCTCAAGTTTTAGATAAGTTTTATTATCTAAATTGTTATGATTATAATTATA
AAGGCACTAAAGCTGTAGCTTATAAATTAGAAGCGGAAAATTTAAAAGGCGAACAAATTAAAAAACGCCCACGATTTGAA
GATGATACAAATATCCCTAAAAAATATCGCACCACTTGGAGTGATTATAAAAATAGTGGTTATGATAGAGGACACACTCT
TTCTAATGCCTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACATTCTTAATGAGTAATATTACTCCACAAAATCCAC
AAATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTCAAAGCTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGATAATAATCCACAAAGAATAAGAAATCAAATTGCCATTCCAAGCTCTTACACTAAGATTTTAAA
AGGCGAGAATTTTAAAGAATGTTATCAAGTGCCAAATCATAAAGTAGAAAATGAGAATATAAAAAATTATAAGGTTAATT
GTGATATTTTAACCGGCAGTTGA

Domains

Predicted by InterProScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(27-215)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE0566 Campylobacter jejuni RM1221

94.419

97.727

0.923
  CJE1441 Campylobacter jejuni RM1221

92.558

97.727

0.905