Detailed information NTG0130992

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: BG07_RS15740
• Genome accession: NZ_CP009651
• Coordinates: 2725619..2726965 (+)
• Length: 448 a.a.
• NCBI ID: WP_040119064.1
• Uniprot ID: -
• Organism: Bacillus pseudomycoides strain BTZ
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2720619..2731965

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BG07_RS15720 (BG07_2684)	-	2721292..2721933 (-)	642	WP_003202049.1	YigZ family protein	-
BG07_RS15725 (BG07_2685)	-	2722174..2723016 (+)	843	WP_006096565.1	DegV family protein	-
BG07_RS15730 (BG07_2686)	-	2723397..2723711 (+)	315	WP_016112543.1	winged helix-turn-helix transcriptional regulator	-
BG07_RS15735 (BG07_2687)	-	2723988..2725286 (+)	1299	WP_040119065.1	NlpC/P60 family protein	-
BG07_RS15740 (BG07_2688)	comFA	2725619..2726965 (+)	1347	WP_040119064.1	DEAD/DEAH box helicase	Machinery gene
BG07_RS15745 (BG07_2689)	-	2726965..2727669 (+)	705	WP_042511394.1	ComF family protein	-
BG07_RS15750 (BG07_2690)	cspC	2727796..2727993 (+)	198	WP_001162040.1	cold shock protein CspC	-
BG07_RS33390	-	2728419..2728544 (-)	126	WP_256388727.1	hypothetical protein	-
BG07_RS15760 (BG07_2691)	hpf	2728655..2729197 (+)	543	WP_003201824.1	ribosome hibernation-promoting factor, HPF/YfiA family	-

Sequence

Protein

• Length: 448 a.a.
• Molecular weight: 51457.89 Da
• Isoelectric Point: 9.5538

>NTDB_id=130992 BG07_RS15740 WP_040119064.1 2725619..2726965(+) (comFA) [Bacillus pseudomycoides strain BTZ]
MLVGRQMLREELPFSKDELDRLERQGDISLERGVIKKSSHYVCQRCGNAEPRLFASFLCKRCNQMCTYCRKCITMGRVGE
CTVLVRDIRDVVWESLPNPLRWEGHLSAGQERAASGVTEAVHQKESFFIWAVCGAGKTEMLFYGIDEALQKGERVCIATP
RTDVVLELAPRLQTVFPDVPIAALYGGSLDREKEARLIVSTTHQLLRYYRAFDVMIVDEIDAFPYAMDKMLHHAVEQASK
ERAAQIYLTATPEETWKRKLWGGKQKGVIIPGRYHRQPLPVPRFRWCGNWKKALKRKEIPHVVFEWLKYYLLKQSPIFLF
VPHVRYIDEVSVLLKKLDDRIEGVHAEDPKRKEKVASFRKGNIPLLVTTTILERGVTVENLQVAVLGAEEVIFSESALVQ
IAGRAGRSHRRPDGDILYFHYGKTEAMIRAKKHIQFMNKKAKQEGLIH

Nucleotide

• Length: 1347 bp

>NTDB_id=130992 BG07_RS15740 WP_040119064.1 2725619..2726965(+) (comFA) [Bacillus pseudomycoides strain BTZ]
ATGCTAGTAGGAAGACAAATGCTACGAGAAGAACTTCCATTTTCGAAAGATGAACTAGATCGTTTGGAAAGACAAGGAGA
TATTTCTTTGGAAAGAGGTGTAATAAAGAAATCGTCACATTATGTATGTCAGCGCTGCGGAAATGCAGAACCGCGGTTAT
TTGCATCATTTCTATGTAAACGATGCAACCAAATGTGCACGTATTGCCGAAAGTGCATCACGATGGGGCGAGTGGGAGAA
TGTACAGTGCTCGTTCGAGATATACGAGATGTAGTATGGGAAAGTTTGCCGAATCCTTTACGGTGGGAGGGCCATTTATC
AGCTGGGCAGGAGAGAGCAGCTAGCGGAGTAACAGAAGCAGTACACCAAAAAGAATCTTTTTTTATATGGGCAGTATGTG
GAGCTGGTAAGACAGAGATGCTTTTTTATGGTATAGATGAAGCTTTACAAAAAGGCGAGCGGGTTTGTATTGCAACGCCG
CGGACTGATGTGGTGTTAGAGCTCGCACCCCGTTTGCAAACTGTTTTTCCAGATGTACCGATTGCTGCGTTATATGGTGG
TAGTTTGGACCGTGAAAAGGAAGCAAGGCTCATCGTTTCTACAACGCACCAGTTGCTTCGTTATTATAGAGCATTTGATG
TTATGATTGTGGATGAAATTGATGCTTTTCCATATGCGATGGACAAGATGCTTCATCATGCAGTAGAGCAAGCGAGTAAA
GAGCGAGCAGCGCAAATTTATTTAACTGCAACTCCGGAAGAAACATGGAAACGTAAGCTATGGGGTGGTAAACAAAAAGG
TGTAATCATTCCGGGGCGTTATCATCGTCAGCCTTTGCCAGTCCCAAGGTTCCGGTGGTGCGGTAATTGGAAAAAGGCGC
TAAAACGAAAAGAAATCCCGCATGTTGTTTTTGAATGGCTAAAGTATTATCTCCTTAAACAATCTCCTATTTTTCTATTT
GTTCCTCACGTACGTTATATTGATGAAGTAAGTGTATTATTAAAAAAATTAGATGATCGCATTGAAGGTGTTCATGCTGA
GGATCCAAAGCGAAAAGAAAAGGTAGCTTCGTTCCGCAAAGGAAATATCCCATTATTAGTAACGACGACGATTTTGGAAC
GCGGCGTGACGGTAGAGAATTTACAAGTAGCGGTGTTAGGGGCGGAAGAGGTCATTTTTTCGGAAAGTGCACTTGTACAA
ATTGCTGGCAGGGCCGGCAGAAGTCATCGCAGGCCAGATGGTGATATTCTTTATTTTCATTATGGAAAAACAGAAGCAAT
GATACGCGCAAAAAAACATATCCAATTTATGAATAAAAAGGCAAAGCAAGAAGGGTTGATACATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (311-408)

• Type III restriction enzyme, res subunit (ResIII) (106-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	50.905	98.661	0.502
comFA	Latilactobacillus sakei subsp. sakei 23K	39.238	99.554	0.391
comFA/cflA	Streptococcus mitis SK321	38.249	96.875	0.371