Detailed information NTG0130797

Bioinformatically predicted

Overview

• Name: luxQ
• Type: Regulator
• Locus tag: IX92_RS19885
• Genome accession: NZ_CP009618
• Coordinates: 856898..859468 (+)
• Length: 856 a.a.
• NCBI ID: WP_043010254.1
• Uniprot ID: A0AAN0SHK2
• Organism: Vibrio coralliilyticus strain RE98
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 851898..864468

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IX92_RS19850 (IX92_19850)	-	852186..852437 (-)	252	WP_029236068.1	YgjV family protein	-
IX92_RS19855 (IX92_19855)	-	852732..853052 (-)	321	WP_006961083.1	DUF496 family protein	-
IX92_RS19860 (IX92_19860)	-	853246..853440 (+)	195	WP_006961082.1	hypothetical protein	-
IX92_RS19865 (IX92_19865)	-	853470..854129 (+)	660	WP_006961081.1	YceH family protein	-
IX92_RS19870 (IX92_19870)	-	854129..854446 (+)	318	WP_019275432.1	GIY-YIG nuclease family protein	-
IX92_RS19875 (IX92_19875)	traF	854513..855652 (+)	1140	WP_039952225.1	conjugal transfer protein TraF	-
IX92_RS19880 (IX92_19880)	luxP	855801..856898 (+)	1098	WP_043010253.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
IX92_RS19885 (IX92_19885)	luxQ	856898..859468 (+)	2571	WP_043010254.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
IX92_RS19890 (IX92_19890)	-	859454..860119 (-)	666	WP_040121665.1	PilZ domain-containing protein	-
IX92_RS19895 (IX92_19895)	glpD	860226..861758 (-)	1533	WP_038161412.1	glycerol-3-phosphate dehydrogenase	-
IX92_RS19900 (IX92_19900)	-	861980..863239 (-)	1260	WP_038161970.1	hydroxymethylglutaryl-CoA reductase	-
IX92_RS19905 (IX92_19905)	-	863330..863608 (-)	279	WP_006961074.1	hypothetical protein	-
IX92_RS29635	-	863665..863826 (-)	162	WP_006961073.1	hypothetical protein	-

Sequence

Protein

• Length: 856 a.a.
• Molecular weight: 95985.27 Da
• Isoelectric Point: 4.7212

>NTDB_id=130797 IX92_RS19885 WP_043010254.1 856898..859468(+) (luxQ) [Vibrio coralliilyticus strain RE98]
MALLTRRGSKSRLATLLTRSIFLTIGVLSLVMVFQNYQVNRQVVSQEVARSKLQTQSLVQQIFNFRLKALEIQQDSYSRN
ESLIEAFAESDVNGLDRFFNGIDQAAPELAPDFRFITAETEVVWDDSNYQFYGISPDQLSHLSDDMTTGGSWHLSQTPSL
LGTRYLMVRRVPIINMASGEVLGYLHIGVVMNNNFALINALLRGSNADQILLSVGSEVIASSTKDKDFRHIEWLEESALD
FTASKYMVSKTDLTISNVATFLSIYTIQDNQSIVILMRSHYIWVAVAGLLLVVIAIYSRLWLGKRVSKELANLMRYTEST
VEIKDASKFPGSPIEEFDQIGQSFELSFQRLSEQEKQFADLFNFSLSPITLWDVEGKLIRSNPAAERSFRVEMGDEQNDY
QLLVEKLGPHIRMCAKGATLTGINIAIREKTYRWNLSPIFVDKGINNIMAQGQDVTSFVDAEIQSQAARKEAEESARVRA
DFLAKMSHELRTPLNGILGVSQLLKGKISNTDDIEHLDVLCNSGEHLLAVLNDILDFSKIEQGKFHIQSADFRLVELISA
VEKIYTPLCDEKGIGFVVETNVSNNTFAHSDQVRLNQILFNLVSNAIKFTHEGEVTVSLFCDGESPESRLNISVRDTGIG
IERERISHIFEPFVQAEATTTREYGGSGLGLAIVHSLVEMLNGQIEIESSIGCGTKFSLSVPIELTESVEQVETSTFLIE
PENLFDRTLNVLLVEDNHTNAFIAKAFCEKYGMEVAWVQDGHNAIDHLKKSDNVDLILMDNQLPNLGGIETTKIIREDLK
LDIPIFACTADGMQDTKRAFLSVGADYVIVKPIKELALNQAFIHYKEEFLTRLEEC

Nucleotide

• Length: 2571 bp

>NTDB_id=130797 IX92_RS19885 WP_043010254.1 856898..859468(+) (luxQ) [Vibrio coralliilyticus strain RE98]
ATGGCATTGTTAACGCGGCGAGGCAGTAAAAGCCGTCTCGCCACATTACTTACCCGTTCTATATTCCTCACTATCGGTGT
CTTATCGTTGGTGATGGTGTTCCAGAACTATCAAGTAAATCGCCAGGTCGTCTCCCAAGAGGTGGCGCGCTCAAAGCTGC
AAACGCAAAGCTTAGTGCAGCAAATTTTCAACTTCCGACTTAAAGCCCTAGAAATCCAGCAAGACAGTTACAGTCGCAAT
GAATCTTTGATTGAGGCTTTTGCTGAATCAGACGTAAATGGATTGGATCGCTTTTTTAATGGCATTGATCAAGCCGCTCC
AGAGTTGGCGCCTGATTTTCGTTTTATCACCGCGGAAACAGAAGTCGTCTGGGATGATTCTAATTACCAGTTCTATGGCA
TCTCACCCGATCAGCTTTCTCATTTAAGTGATGATATGACCACAGGTGGCAGTTGGCATTTATCACAAACTCCATCTTTG
TTAGGTACGCGTTATCTGATGGTTCGTCGGGTGCCTATCATTAACATGGCTTCTGGCGAAGTACTGGGTTATCTCCACAT
TGGCGTTGTGATGAACAATAACTTTGCGTTGATCAATGCTCTATTGAGAGGTAGTAACGCAGATCAAATCCTGCTTTCTG
TTGGCTCAGAAGTGATTGCGTCGAGCACCAAAGACAAAGATTTCCGGCACATCGAATGGCTTGAAGAGTCTGCGTTGGAT
TTCACCGCCAGTAAATACATGGTATCGAAGACAGACCTGACCATTAGCAATGTGGCAACCTTTCTATCGATTTACACCAT
TCAGGATAATCAATCTATCGTGATCCTTATGCGAAGCCACTATATATGGGTGGCAGTAGCAGGGTTACTTTTGGTTGTCA
TTGCGATTTATAGCCGCTTGTGGCTTGGAAAACGTGTATCGAAAGAACTCGCTAACTTAATGCGCTATACCGAAAGTACG
GTCGAAATTAAAGATGCCAGTAAGTTTCCTGGCTCTCCGATTGAAGAGTTTGATCAAATTGGTCAATCATTTGAACTGTC
ATTCCAACGTTTAAGCGAGCAAGAAAAGCAATTTGCTGATTTGTTCAATTTCTCCCTTTCTCCCATTACTCTTTGGGATG
TCGAAGGAAAATTGATTAGAAGCAATCCAGCCGCAGAGCGCAGTTTTCGTGTAGAAATGGGTGATGAGCAAAATGATTAT
CAGCTTTTGGTTGAGAAGCTCGGGCCACATATTCGCATGTGTGCGAAAGGAGCAACGCTAACGGGTATTAATATTGCCAT
TAGAGAGAAAACTTATCGCTGGAACCTTTCCCCCATCTTTGTCGATAAGGGTATTAACAATATCATGGCGCAAGGTCAGG
ATGTGACTAGCTTTGTCGATGCTGAGATTCAAAGCCAAGCGGCAAGAAAAGAAGCTGAAGAATCTGCAAGAGTACGGGCG
GATTTCTTAGCTAAGATGAGCCATGAATTGCGGACGCCACTTAACGGAATTTTAGGCGTTTCCCAGTTGCTTAAAGGGAA
AATATCTAATACAGACGATATAGAGCATTTAGACGTACTGTGTAACAGCGGTGAACACCTGCTTGCGGTATTGAATGACA
TTCTTGATTTTTCTAAGATCGAACAGGGTAAGTTCCATATTCAATCTGCCGATTTTCGCTTGGTCGAATTGATCAGCGCC
GTTGAAAAAATCTATACGCCATTGTGTGATGAAAAAGGCATTGGATTTGTTGTGGAAACTAATGTCAGCAATAACACTTT
CGCTCATAGTGATCAGGTCAGGTTGAATCAAATCTTGTTTAACTTGGTCAGTAACGCAATTAAGTTTACTCACGAAGGTG
AGGTAACGGTGTCACTATTTTGTGATGGTGAAAGTCCAGAATCGCGCTTGAACATCAGCGTTAGAGATACGGGGATCGGC
ATTGAACGTGAGCGTATTTCTCATATCTTCGAACCTTTCGTGCAAGCCGAAGCTACGACAACACGCGAATATGGCGGAAG
TGGACTTGGTTTAGCGATAGTCCACAGTTTAGTCGAGATGCTAAATGGACAGATTGAGATTGAAAGTTCTATAGGCTGTG
GGACTAAATTCAGTTTATCTGTACCGATTGAACTGACTGAGTCCGTTGAGCAGGTTGAAACCAGTACATTCCTGATTGAG
CCTGAAAACCTATTTGATAGAACATTGAATGTTTTACTTGTCGAAGACAATCATACCAATGCATTTATTGCGAAGGCGTT
CTGTGAAAAATATGGAATGGAGGTGGCTTGGGTTCAGGATGGGCATAATGCTATCGATCATCTGAAGAAATCGGATAACG
TCGATCTAATCTTGATGGATAATCAACTGCCAAATTTAGGTGGTATTGAAACGACTAAAATCATCCGCGAAGATTTGAAA
CTTGATATTCCTATCTTTGCCTGTACTGCTGACGGAATGCAGGACACCAAACGCGCATTTTTGAGCGTTGGCGCCGACTA
TGTAATAGTCAAACCAATTAAAGAACTAGCTCTAAATCAGGCATTCATTCATTACAAAGAAGAATTTCTTACCAGGCTAG
AAGAGTGTTGA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (591-703)

• His Kinase A (phospho-acceptor) domain (HisKA) (479-543)

• Response regulator receiver domain (Response_reg) (731-841)

• LuxQ, periplasmic (LuxQ-periplasm) (42-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxQ	Vibrio cholerae strain A1552	49.344	98.014	0.484