Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | IX92_RS12865 | Genome accession | NZ_CP009617 |
| Coordinates | 2799483..2800088 (+) | Length | 201 a.a. |
| NCBI ID | WP_006958122.1 | Uniprot ID | A0A2A2CS00 |
| Organism | Vibrio coralliilyticus strain RE98 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2794483..2805088
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IX92_RS12845 (IX92_12845) | - | 2794789..2795703 (-) | 915 | WP_021457059.1 | ABC transporter ATP-binding protein | - |
| IX92_RS12850 (IX92_12850) | - | 2795904..2797574 (-) | 1671 | WP_021457058.1 | SulP family inorganic anion transporter | - |
| IX92_RS12855 (IX92_12855) | can | 2797929..2798588 (+) | 660 | WP_006958120.1 | carbonate dehydratase | - |
| IX92_RS12860 (IX92_12860) | hpt | 2798646..2799176 (-) | 531 | WP_006958121.1 | hypoxanthine phosphoribosyltransferase | - |
| IX92_RS12865 (IX92_12865) | opaR | 2799483..2800088 (+) | 606 | WP_006958122.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| IX92_RS12870 (IX92_12870) | lpdA | 2800206..2801636 (-) | 1431 | WP_006958123.1 | dihydrolipoyl dehydrogenase | - |
| IX92_RS12875 (IX92_12875) | aceF | 2801892..2803781 (-) | 1890 | WP_038509664.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
Sequence
Protein
Download Length: 201 a.a. Molecular weight: 23243.41 Da Isoelectric Point: 5.2990
>NTDB_id=130780 IX92_RS12865 WP_006958122.1 2799483..2800088(+) (opaR) [Vibrio coralliilyticus strain RE98]
MDSIAKRPRTRLSPQKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLNYVVRQFSNFLS
DNIDLDIHAKENLRNLTSAMVDLVVNDCHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDDHDPA
DLATLFHGICYSLFVQANRTQDDESVNRLTQSYLDMLCIYK
MDSIAKRPRTRLSPQKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLNYVVRQFSNFLS
DNIDLDIHAKENLRNLTSAMVDLVVNDCHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDDHDPA
DLATLFHGICYSLFVQANRTQDDESVNRLTQSYLDMLCIYK
Nucleotide
Download Length: 606 bp
>NTDB_id=130780 IX92_RS12865 WP_006958122.1 2799483..2800088(+) (opaR) [Vibrio coralliilyticus strain RE98]
ATGGATTCTATAGCTAAGAGACCGCGTACGCGTCTTTCACCACAAAAACGTAAACAACAACTGATGGAAATCGCATTAGA
GGTGTTTGCTCGTCGTGGTATTGGTCGCGGTGGTCATGCTGACATTGCAGAAATCGCTCAGGTTTCTGTTGCTACAGTTT
TTAACTACTTCCCAACCCGCGAAGACTTGGTTGATGATGTACTTAACTACGTAGTTCGTCAGTTCTCAAACTTCCTATCA
GATAATATCGATCTTGATATTCATGCAAAAGAAAACCTACGCAACCTAACTTCGGCAATGGTTGACCTTGTTGTCAACGA
CTGCCACTGGCTTAAAGTTTGGTTCGAGTGGAGTGCATCGACACGTGATGAAGTATGGCCGCTGTTTGTTACGACAAACC
GTACCAACCAGCTTCTAGTTCAGAACATGTTTATCAAAGCAATCGAGCGTGGTGAAGTATGTGATGATCACGACCCAGCA
GACCTAGCGACACTATTCCACGGCATCTGCTACTCTCTGTTTGTGCAGGCTAACCGTACTCAAGATGATGAGTCTGTAAA
CCGCCTGACACAAAGCTACCTAGATATGCTTTGCATCTACAAGTAG
ATGGATTCTATAGCTAAGAGACCGCGTACGCGTCTTTCACCACAAAAACGTAAACAACAACTGATGGAAATCGCATTAGA
GGTGTTTGCTCGTCGTGGTATTGGTCGCGGTGGTCATGCTGACATTGCAGAAATCGCTCAGGTTTCTGTTGCTACAGTTT
TTAACTACTTCCCAACCCGCGAAGACTTGGTTGATGATGTACTTAACTACGTAGTTCGTCAGTTCTCAAACTTCCTATCA
GATAATATCGATCTTGATATTCATGCAAAAGAAAACCTACGCAACCTAACTTCGGCAATGGTTGACCTTGTTGTCAACGA
CTGCCACTGGCTTAAAGTTTGGTTCGAGTGGAGTGCATCGACACGTGATGAAGTATGGCCGCTGTTTGTTACGACAAACC
GTACCAACCAGCTTCTAGTTCAGAACATGTTTATCAAAGCAATCGAGCGTGGTGAAGTATGTGATGATCACGACCCAGCA
GACCTAGCGACACTATTCCACGGCATCTGCTACTCTCTGTTTGTGCAGGCTAACCGTACTCAAGATGATGAGTCTGTAAA
CCGCCTGACACAAAGCTACCTAGATATGCTTTGCATCTACAAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
85 |
99.502 |
0.846 |
| hapR | Vibrio cholerae C6706 |
76.382 |
99.005 |
0.756 |
| hapR | Vibrio cholerae strain A1552 |
76.382 |
99.005 |
0.756 |