Detailed information NTG0130779

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: IX92_RS12700
• Genome accession: NZ_CP009617
• Coordinates: 2753072..2756458 (+)
• Length: 1128 a.a.
• NCBI ID: WP_043009181.1
• Uniprot ID: A0AAN0SCI5
• Organism: Vibrio coralliilyticus strain RE98
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2748072..2761458

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IX92_RS12680 (IX92_12680)	erpA	2748537..2748878 (-)	342	WP_019276906.1	iron-sulfur cluster insertion protein ErpA	-
IX92_RS12685 (IX92_12685)	hemL	2749134..2750426 (+)	1293	WP_043009177.1	glutamate-1-semialdehyde 2,1-aminomutase	-
IX92_RS12690 (IX92_12690)	-	2750691..2751776 (+)	1086	WP_043009179.1	AI-2E family transporter	-
IX92_RS12695 (IX92_12695)	rsmC	2751855..2752877 (+)	1023	WP_043009673.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
IX92_RS12700 (IX92_12700)	chiS	2753072..2756458 (+)	3387	WP_043009181.1	response regulator	Regulator
IX92_RS12705 (IX92_12705)	-	2757145..2758827 (+)	1683	WP_043009183.1	ABC transporter substrate-binding protein	-
IX92_RS12710 (IX92_12710)	-	2758998..2759984 (+)	987	WP_006958093.1	ABC transporter permease	-
IX92_RS12715 (IX92_12715)	-	2759987..2761012 (+)	1026	WP_006958094.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127137.00 Da
• Isoelectric Point: 6.2534

>NTDB_id=130779 IX92_RS12700 WP_043009181.1 2753072..2756458(+) (chiS) [Vibrio coralliilyticus strain RE98]
MFKLYRKQRFKRLQHTLMLAFLVLSITPLTIIAIFFLQSHTKDLQEQSTSHLMSVRDSKQQQVTDYMYAKESEVMGFVRS
ELAYASGGRFYGLVNAFRSLGLDMAQAREYAQRRYIPGSGDQIKTSILPQSNVYTGTERYRLLHKRYHRAYLELLKRSDF
DDALLVDLEGNVTYSIFKHDNYGTNLLTGRFRDTNLGRTFHKLKTQVTEKRKSNEDYTPVIISDFEMDRGKPVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLIADTNNASAMKTLLVGADHKSRTMAYEQKDIDKSREVVDLALEGKTDVGTYTNTLGEA
TIAAYSPISFKGVDWAIVVEVPEKEAFARVHQLETLFVFAMLCAIVLVVAASHYLSNFITAPLLKLTWAAEKVSAGDLDT
DIINTERKDEIGRLAISFERMQRSIRDKILLIKQQNEELESNLKLIQKQNDELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPITADHKYQLDIIISSGQRLATLVDDLLDYHKMRYGNLDIETRAVDISGATRLVLELSTHLVGNKPIRI
INQVPNDPLWVCADPQRLEQVLYNLVGNAIKYTSEGKIVISATQVDDNIRVQVVDTGQGIPAEQLEHIFEPLIQAGSDSS
RYRQGAGLGLSISRQLIDLMQGTLYVSSQPMVGTTFSFTLPIASTEQIGLASHIEGAHFIAPENNDLEIIEGSNLPENPD
GPLLLVVDDEPVNLRVLDSFLRLEGYRVRTAKNGEEAVESVGHEKPELMLLDIMMPGMSGYQVCEVLRKDYDHAQLPVIM
LTALNQPDDRVRGFEAGANDYLSKPFNKQELAARITAHLTASKAEQRRIENQQLQTELKQRAMVEASLLETQGRLLEQLE
SAPEAIICVRDDNKIRFTNDAASRLFKRTTEQLRRSNADELIAPKFLNVEQPHYCGVIDVYVEDVRQHLSADILKLPQGS
GLKSMYIFNVGGSVNAARINNLETAVEALSSYAFEGDKAKLQELKELGGEFTRLADRATTDSKSKQEVMREVLVDAMTSA
LTYWESVTGQSKFAFAEQSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSLEYILEHCKEMSPERTHIESLRD
KLQHLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=130779 IX92_RS12700 WP_043009181.1 2753072..2756458(+) (chiS) [Vibrio coralliilyticus strain RE98]
ATGTTTAAGTTGTACCGAAAACAAAGATTTAAGCGCCTGCAACACACTTTAATGCTGGCATTTCTTGTATTGAGTATTAC
GCCACTCACGATCATCGCGATCTTTTTCCTCCAGTCTCATACCAAAGATTTACAGGAGCAAAGTACTTCACACTTAATGT
CCGTACGAGACAGTAAACAGCAACAAGTCACTGACTACATGTACGCCAAAGAATCGGAAGTGATGGGCTTTGTTCGCTCT
GAACTGGCTTATGCCAGTGGCGGGCGTTTCTACGGCTTAGTCAATGCGTTTCGCAGCTTAGGACTGGATATGGCTCAGGC
GCGCGAGTACGCTCAGCGGCGTTACATTCCTGGCTCAGGCGATCAGATCAAAACCTCAATACTGCCTCAGTCCAATGTTT
ATACCGGTACGGAGCGATATCGACTGCTGCATAAACGCTATCACAGAGCCTATCTAGAACTGCTCAAACGCTCAGACTTT
GACGACGCTTTGCTGGTTGATTTAGAAGGTAACGTCACCTACTCCATCTTTAAACACGACAACTACGGCACCAATCTGCT
GACTGGCCGCTTTCGTGATACCAATCTAGGCAGAACCTTCCACAAGCTGAAAACTCAGGTTACTGAAAAGCGTAAATCCA
ATGAAGATTACACACCGGTGATCATTTCAGACTTTGAGATGGACAGAGGTAAACCTGTCGCTTGGCTCGGTGCTCCCATC
GTTCAGCAAGGTTATCTTCACAGCTATGCCATGTTCCGTTTACCAAATAATGGCATCACTAAGCTAATAGCCGATACCAA
CAACGCTTCAGCAATGAAAACCTTGCTGGTCGGCGCTGACCATAAATCAAGAACCATGGCTTATGAGCAAAAAGACATCG
ATAAGAGCCGCGAAGTTGTTGATTTAGCATTGGAAGGAAAAACCGATGTTGGAACATACACAAACACGCTAGGAGAGGCG
ACCATCGCGGCTTACAGTCCGATCTCGTTTAAAGGTGTCGACTGGGCCATTGTGGTAGAAGTGCCAGAAAAAGAAGCTTT
TGCACGCGTCCACCAACTCGAAACTCTGTTCGTATTTGCCATGCTATGTGCAATTGTACTGGTGGTTGCCGCGTCCCATT
ACTTGTCTAATTTTATTACCGCGCCTTTGTTGAAGCTGACGTGGGCGGCAGAAAAAGTCTCGGCTGGCGATCTCGATACA
GACATCATCAATACAGAGCGAAAAGATGAGATAGGCCGACTGGCCATCAGCTTTGAGCGCATGCAACGCTCCATTCGCGA
CAAAATACTGCTCATAAAACAGCAAAATGAAGAGCTGGAAAGCAACCTAAAGCTGATCCAAAAACAAAATGACGAGCTGC
AATTGGCGAACAAACTCAAAGATGAGTTCCTCGCCACCACCTCTCATGAATTGCGAACTCCACTCCATGGCATGGTAGGT
ATCGCAGAAGCGCTAATCTCCGGCGCCAATGGGCCAATTACCGCGGATCACAAGTACCAGCTCGATATCATCATCAGTAG
CGGCCAGCGCTTGGCCACCTTGGTTGATGACCTGCTTGATTACCACAAAATGCGTTACGGTAATCTCGATATCGAAACCC
GAGCAGTGGACATCTCCGGTGCAACACGCTTGGTGCTCGAACTGTCGACTCACTTAGTGGGTAACAAACCCATTCGCATC
ATTAATCAGGTTCCTAACGATCCGCTATGGGTATGCGCCGACCCTCAACGCTTAGAGCAAGTGCTATACAACCTCGTTGG
TAACGCCATCAAATACACCAGTGAAGGCAAAATCGTTATTTCCGCCACACAGGTCGATGATAACATCCGCGTTCAGGTGG
TAGATACTGGTCAGGGGATCCCTGCTGAGCAGCTTGAACACATTTTTGAACCCTTGATTCAGGCTGGCAGTGATAGTAGC
CGTTATCGCCAAGGGGCCGGCCTTGGTCTATCTATCAGCCGTCAGTTGATTGATTTGATGCAAGGCACGCTCTACGTCAG
CAGCCAACCTATGGTTGGTACGACCTTTAGCTTCACTTTGCCAATCGCCTCAACCGAGCAGATAGGCCTCGCAAGCCATA
TCGAAGGCGCGCATTTCATTGCTCCAGAAAACAATGACCTAGAAATAATCGAAGGCTCAAATTTACCGGAAAATCCAGAC
GGGCCATTGCTGTTAGTGGTCGATGATGAACCGGTCAATCTGCGTGTCTTAGACAGCTTCCTTCGCCTCGAAGGCTACCG
AGTACGCACCGCGAAAAATGGCGAAGAAGCCGTTGAATCCGTTGGTCATGAAAAACCAGAACTGATGCTACTCGATATCA
TGATGCCGGGAATGAGCGGCTACCAGGTGTGTGAAGTCTTGCGCAAAGACTATGACCATGCTCAGCTCCCCGTCATCATG
CTCACAGCATTGAATCAGCCCGATGACCGAGTTCGAGGTTTCGAAGCCGGAGCCAATGACTACTTATCAAAACCTTTTAA
CAAACAAGAGCTCGCCGCACGGATTACAGCACATTTAACCGCGAGCAAAGCTGAACAGCGTCGGATTGAAAACCAGCAAC
TACAAACGGAGCTTAAGCAGCGCGCCATGGTTGAAGCCAGTTTACTGGAAACTCAGGGGCGTCTACTTGAGCAATTGGAA
TCAGCCCCAGAAGCGATTATCTGTGTACGTGACGACAATAAAATCCGCTTCACCAATGATGCAGCTTCTCGCCTGTTTAA
ACGCACCACAGAACAATTACGCCGTTCCAATGCAGATGAGTTGATTGCACCAAAATTCCTTAACGTAGAACAGCCGCACT
ACTGTGGCGTCATTGATGTTTATGTCGAAGATGTCCGCCAGCACTTGTCCGCAGACATTCTCAAACTACCACAAGGCTCT
GGACTCAAATCCATGTACATCTTTAACGTGGGGGGCAGTGTCAATGCCGCGCGGATCAATAACCTAGAAACCGCGGTTGA
AGCCCTTTCCAGCTACGCGTTTGAAGGGGATAAGGCCAAACTGCAAGAGTTAAAAGAGTTAGGTGGAGAGTTTACGCGGT
TAGCCGATCGGGCTACCACTGACAGCAAATCCAAGCAAGAAGTCATGCGTGAAGTCTTAGTCGATGCAATGACAAGTGCG
CTAACTTATTGGGAAAGCGTTACTGGTCAAAGCAAGTTTGCTTTCGCAGAGCAAAGCGGGTTATGGCGTGTGTACCTCGA
CCGTAGCACCTTACAGACTCGGACTCTGGACAAATACCTGCGAGTCGAAACGTTACCAAAAACACCGCGCTGGCGAACGG
TACTGAGTTCTCTTGAGTACATCCTTGAACACTGTAAAGAAATGAGCCCAGAGCGCACTCATATTGAGAGCCTTCGCGAT
AAGCTGCAACATCTCCTAACCAGCTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (725-835)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• HAMP domain (HAMP) (375-427)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-682)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	79.255	100	0.793