Detailed information    

insolico Bioinformatically predicted

Overview


Name   letA   Type   Regulator
Locus tag   ACX61_RS17515 Genome accession   NZ_CP012006
Coordinates   3667187..3667822 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain Ab04-mff     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 3662187..3672822
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACX61_RS17495 (ACX61_17495) - 3662264..3663079 (+) 816 WP_005120616.1 DsbC family protein -
  ACX61_RS17500 (ACX61_17500) - 3663324..3664625 (+) 1302 WP_000805827.1 homoserine dehydrogenase -
  ACX61_RS17505 (ACX61_17505) thrC 3664681..3665820 (+) 1140 WP_000063593.1 threonine synthase -
  ACX61_RS17510 (ACX61_17510) pbpG 3665928..3666974 (-) 1047 WP_001984577.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  ACX61_RS17515 (ACX61_17515) letA 3667187..3667822 (+) 636 WP_000633799.1 response regulator Regulator
  ACX61_RS17520 (ACX61_17520) pilS 3667833..3669401 (+) 1569 WP_049592540.1 PAS domain-containing sensor histidine kinase Regulator
  ACX61_RS17525 (ACX61_17525) - 3669426..3670847 (+) 1422 WP_000840547.1 sigma-54 dependent transcriptional regulator -
  ACX61_RS17530 (ACX61_17530) - 3670851..3672035 (-) 1185 WP_000939107.1 S41 family peptidase -

Sequence


Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=130248 ACX61_RS17515 WP_000633799.1 3667187..3667822(+) (letA) [Acinetobacter baumannii strain Ab04-mff]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=130248 ACX61_RS17515 WP_000633799.1 3667187..3667822(+) (letA) [Acinetobacter baumannii strain Ab04-mff]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAATATGCCGGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCATTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGTGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55

  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55


Multiple sequence alignment