Detailed information NTG0129668

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ABU16_RS18890
• Genome accession: NZ_CP011882
• Coordinates: 3625761..3627026 (+)
• Length: 421 a.a.
• NCBI ID: WP_019712521.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain TO-A JPC
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3620761..3632026

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABU16_RS18870 (ABU16_3756)	yrrB	3622133..3622753 (-)	621	WP_237957762.1	tetratricopeptide repeat protein	-
ABU16_RS18875 (ABU16_3757)	mnmA	3622839..3623954 (-)	1116	WP_032677111.1	tRNA 2-thiouridine(34) synthase MnmA	-
ABU16_RS18880 (ABU16_3758)	iscSA	3623982..3625124 (-)	1143	WP_003229769.1	cysteine desulfurase family protein	-
ABU16_RS18885 (ABU16_3759)	cymR	3625143..3625559 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
ABU16_RS18890 (ABU16_3760)	rarA	3625761..3627026 (+)	1266	WP_019712521.1	replication-associated recombination protein A	Machinery gene
ABU16_RS18895 (ABU16_3761)	tcdA	3627068..3627832 (-)	765	WP_003229763.1	tRNA threonylcarbamoyladenosine dehydratase	-
ABU16_RS18905 (ABU16_3763)	aspS	3628168..3629946 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
ABU16_RS18910 (ABU16_3764)	hisS	3629960..3631234 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
ABU16_RS22185 (ABU16_3765)	yrzK	3631616..3631786 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46493.38 Da
• Isoelectric Point: 7.1665

>NTDB_id=129668 ABU16_RS18890 WP_019712521.1 3625761..3627026(+) (rarA) [Bacillus subtilis strain TO-A JPC]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVCIDDQAMEHFANGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=129668 ABU16_RS18890 WP_019712521.1 3625761..3627026(+) (rarA) [Bacillus subtilis strain TO-A JPC]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTATGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGACTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAACATCGGGGCCTTGGCACCTATTCTGTATGCATTGATGATCAGGCGATGGAGCATTTTGCCAACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993