Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   M444_RS19820 Genome accession   NZ_CP011664
Coordinates   4582185..4583309 (-) Length   374 a.a.
NCBI ID   WP_008743311.1    Uniprot ID   A0ABZ1RK95
Organism   Streptomyces sp. Mg1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4577185..4588309
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M444_RS19790 (M444_19770) cseB 4577400..4578107 (-) 708 WP_008743305.1 two-component system response regulator CseB -
  M444_RS19795 (M444_19775) - 4578147..4578797 (-) 651 WP_008743306.1 hypothetical protein -
  M444_RS19800 (M444_19780) - 4578836..4579396 (-) 561 WP_037794920.1 SigE family RNA polymerase sigma factor -
  M444_RS19805 (M444_19785) - 4579582..4580520 (-) 939 WP_008743308.1 A/G-specific adenine glycosylase -
  M444_RS19810 (M444_19790) - 4580517..4581158 (-) 642 WP_047960648.1 phosphatase PAP2 family protein -
  M444_RS19815 (M444_19795) - 4581319..4582137 (+) 819 WP_050779411.1 hypothetical protein -
  M444_RS19820 (M444_19800) disA 4582185..4583309 (-) 1125 WP_008743311.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  M444_RS19825 (M444_19805) radA/sms 4583459..4584874 (-) 1416 WP_008743312.1 DNA repair protein RadA Machinery gene
  M444_RS19830 (M444_19810) - 4585042..4586877 (+) 1836 WP_047960650.1 sigma-70 family RNA polymerase sigma factor -
  M444_RS19835 (M444_19815) - 4586898..4587704 (-) 807 WP_008743314.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40320.32 Da        Isoelectric Point: 5.0226

>NTDB_id=129174 M444_RS19820 WP_008743311.1 4582185..4583309(-) (disA) [Streptomyces sp. Mg1]
MAAKDGAAASGKSGASSKQEAMMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKSVEAMCTGGFVLDVEFTATRLR
ELCKLDGALIIDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVDEALPALDALTHPELLELAIVAKALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=129174 M444_RS19820 WP_008743311.1 4582185..4583309(-) (disA) [Streptomyces sp. Mg1]
GTGGCAGCCAAGGACGGGGCAGCAGCATCCGGCAAGTCGGGAGCGAGCTCCAAGCAGGAGGCCATGATGCGTGCCTCGCT
GAGCGCGGTCGCACCTGGTCAGCCGCTGCGTGACGGCCTGGAACGGATCGTTCGCGGCAACACCGGCGGGCTGATCGTCC
TCGGGATGGACAAGTCCGTCGAGGCGATGTGTACCGGCGGTTTCGTGCTGGACGTGGAGTTCACCGCGACGCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTGATCATCGACAAGGACATCACCAAGATCCTGCGGGCGGGGGTGCAGCTCGTCCC
CGACGCGTCGATCCCGACGGAGGAGACGGGCACGCGGCACCGGACCGCCGACCGGGTCTCGAAGCAGTGCGGGTTCCCCG
TCGTCTCGGTCTCCCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGGGAGCGGCGCGTGCTGGAGGAGTCGGGGGCG
ATCCTGTCCCGGGCGAACCAGGCGCTCGCGACGCTGGAGCGGTACAAGCTGCGGCTCGACGAGGTCGCGGGGACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTCACGGTGCGCGACGTGACGGCGGTCGCGCAGCGGCTGGAAATGGTTCGCCGGATCG
CGACGGAGATCGCGGAGTACGTGGTCGAGCTGGGCACGGACGGGCGACTGCTCTCCCTCCAGCTGGACGAGCTGACGGTG
GGCATCGAGCAGGAACGCGAGCTGGTCATCCGGGACTACGTGCCGGAGCCGACGGCGAAGCGGTCGCGGACGGTGGACGA
GGCGCTGCCGGCGCTGGACGCGCTGACGCATCCGGAGCTGCTGGAACTGGCCATCGTCGCGAAGGCGCTGGGGTACACGG
GTTCGCCGGAGACCCTGGACTCGGCGGTGTCCCCGCGGGGCTACCGGCTGCTGGCGAAGGTGCCGCGGCTGCCGGGGGCC
ATCATCGAGCGGCTGGTGGAGCACTTCGGGGGCCTGCAGAAGCTGCTGGCGGCGTCGGTGGACGACCTCCAGACCGTGGA
CGGCGTCGGCGAGGCCCGTGCGCGCAGCGTCCGCGAGGGCCTGTCCCGCCTGGCGGAATCCTCGATCCTGGAACGCTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441


Multiple sequence alignment