Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | LA58_RS10500 | Genome accession | NZ_CP009420 |
| Coordinates | 2022050..2022514 (+) | Length | 154 a.a. |
| NCBI ID | WP_011798959.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain NM3682 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2017050..2027514
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LA58_RS10500 (LA58_11100) | comE | 2022050..2022514 (+) | 465 | WP_011798959.1 | ComEA family DNA-binding protein | Machinery gene |
| LA58_RS14505 | - | 2023189..2023293 (+) | 105 | Protein_1976 | IS1595 family transposase | - |
| LA58_RS10510 (LA58_11110) | - | 2023342..2023650 (-) | 309 | WP_017629289.1 | membrane protein | - |
| LA58_RS14110 | - | 2023877..2024104 (+) | 228 | WP_153310284.1 | hypothetical protein | - |
| LA58_RS10520 (LA58_11120) | aroG | 2024266..2025321 (+) | 1056 | WP_002235429.1 | 3-deoxy-7-phosphoheptulonate synthase AroG | - |
| LA58_RS10525 (LA58_11125) | - | 2025389..2025877 (+) | 489 | WP_002235430.1 | dihydrofolate reductase | - |
| LA58_RS10530 (LA58_11130) | - | 2026227..2026703 (-) | 477 | WP_002226026.1 | CYTH domain-containing protein | - |
| LA58_RS10535 (LA58_11135) | - | 2026715..2027143 (-) | 429 | WP_002226027.1 | CopD family protein | - |
| LA58_RS10545 (LA58_11145) | - | 2027255..2027500 (+) | 246 | WP_002226028.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 154 a.a. Molecular weight: 16563.76 Da Isoelectric Point: 10.8773
>NTDB_id=129107 LA58_RS10500 WP_011798959.1 2022050..2022514(+) (comE) [Neisseria meningitidis strain NM3682]
MLYPEKMSGMAGRHPYGVRSGLRRNGLKLWDIHFRMTRFIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINA
ASQQELEALPGIGPAKAKAIAEYRAQNGAFKSVDDLTKVKGIGPAVLAKLKDQASVGAPAPKGPAKPALPADKK
MLYPEKMSGMAGRHPYGVRSGLRRNGLKLWDIHFRMTRFIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINA
ASQQELEALPGIGPAKAKAIAEYRAQNGAFKSVDDLTKVKGIGPAVLAKLKDQASVGAPAPKGPAKPALPADKK
Nucleotide
Download Length: 465 bp
>NTDB_id=129107 LA58_RS10500 WP_011798959.1 2022050..2022514(+) (comE) [Neisseria meningitidis strain NM3682]
TTGCTTTACCCGGAAAAAATGTCGGGGATGGCGGGACGGCATCCGTACGGCGTCCGGTCGGGTTTGCGGAGGAACGGCTT
GAAACTTTGGGATATTCATTTTAGAATGACTCGTTTTATCGTCGCAAGATGCGGTTTATTGTTTGCAACCCTTAAAGGAA
AAACCATGAAGAAAATGTTCGTGCTGTTCTGTATGCTGTTCTCCTGCGCCTTCTCCCTTGCGGCGGTAAACATCAATGCG
GCTTCGCAGCAGGAGTTGGAGGCGCTGCCGGGCATAGGCCCTGCGAAGGCGAAGGCCATTGCGGAATACCGTGCGCAAAA
CGGTGCGTTCAAGTCTGTGGACGATTTGACCAAGGTAAAGGGCATCGGCCCTGCGGTGCTGGCGAAGCTGAAGGATCAGG
CTTCTGTCGGCGCGCCCGCACCAAAAGGCCCGGCAAAACCGGCTCTGCCCGCGGATAAAAAATAG
TTGCTTTACCCGGAAAAAATGTCGGGGATGGCGGGACGGCATCCGTACGGCGTCCGGTCGGGTTTGCGGAGGAACGGCTT
GAAACTTTGGGATATTCATTTTAGAATGACTCGTTTTATCGTCGCAAGATGCGGTTTATTGTTTGCAACCCTTAAAGGAA
AAACCATGAAGAAAATGTTCGTGCTGTTCTGTATGCTGTTCTCCTGCGCCTTCTCCCTTGCGGCGGTAAACATCAATGCG
GCTTCGCAGCAGGAGTTGGAGGCGCTGCCGGGCATAGGCCCTGCGAAGGCGAAGGCCATTGCGGAATACCGTGCGCAAAA
CGGTGCGTTCAAGTCTGTGGACGATTTGACCAAGGTAAAGGGCATCGGCCCTGCGGTGCTGGCGAAGCTGAAGGATCAGG
CTTCTGTCGGCGCGCCCGCACCAAAAGGCCCGGCAAAACCGGCTCTGCCCGCGGATAAAAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Neisseria gonorrhoeae MS11 |
93.443 |
79.221 |
0.74 |
| comE | Neisseria gonorrhoeae MS11 |
93.443 |
79.221 |
0.74 |
| comE | Neisseria gonorrhoeae MS11 |
93.443 |
79.221 |
0.74 |
| comE | Neisseria gonorrhoeae MS11 |
93.443 |
79.221 |
0.74 |