Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | LA50_RS07470 | Genome accession | NZ_CP009418 |
| Coordinates | 1391624..1392088 (+) | Length | 154 a.a. |
| NCBI ID | WP_025463168.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain NM3686 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1386624..1397088
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LA50_RS07470 (LA50_07870) | comE | 1391624..1392088 (+) | 465 | WP_025463168.1 | ComEA family DNA-binding protein | Machinery gene |
| LA50_RS14425 | - | 1392763..1392867 (+) | 105 | Protein_1410 | IS1595 family transposase | - |
| LA50_RS07480 (LA50_07880) | - | 1392916..1393224 (-) | 309 | WP_017629289.1 | membrane protein | - |
| LA50_RS14015 | - | 1393451..1393678 (+) | 228 | WP_153310284.1 | hypothetical protein | - |
| LA50_RS07490 (LA50_07890) | aroG | 1393840..1394895 (+) | 1056 | WP_002235429.1 | 3-deoxy-7-phosphoheptulonate synthase AroG | - |
| LA50_RS07495 (LA50_07895) | - | 1394963..1395451 (+) | 489 | WP_002235430.1 | dihydrofolate reductase | - |
| LA50_RS07500 (LA50_07900) | - | 1395801..1396277 (-) | 477 | WP_002226026.1 | CYTH domain-containing protein | - |
| LA50_RS07505 (LA50_07905) | - | 1396289..1396717 (-) | 429 | WP_002226027.1 | CopD family protein | - |
| LA50_RS07515 (LA50_07915) | - | 1396829..1397074 (+) | 246 | WP_002226028.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 154 a.a. Molecular weight: 16561.83 Da Isoelectric Point: 10.9695
>NTDB_id=129006 LA50_RS07470 WP_025463168.1 1391624..1392088(+) (comE) [Neisseria meningitidis strain NM3686]
MLYPEKMSGMAGRHPYGVRSGLRRNGLKLWDIHFRMTRFIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINA
ASQQELEALPGIGPAKAKAIAEYRAQNGAFKSVDDLTKVKGIGPAVLAKLKDQASVGAPAPKAPAKPVLPAAKK
MLYPEKMSGMAGRHPYGVRSGLRRNGLKLWDIHFRMTRFIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINA
ASQQELEALPGIGPAKAKAIAEYRAQNGAFKSVDDLTKVKGIGPAVLAKLKDQASVGAPAPKAPAKPVLPAAKK
Nucleotide
Download Length: 465 bp
>NTDB_id=129006 LA50_RS07470 WP_025463168.1 1391624..1392088(+) (comE) [Neisseria meningitidis strain NM3686]
TTGCTTTACCCGGAAAAAATGTCGGGGATGGCGGGACGGCATCCGTACGGCGTCCGGTCGGGTTTGCGGAGGAACGGCTT
GAAACTTTGGGATATTCATTTTAGAATGACTCGTTTTATCGTCGCAAGATGCGGTTTATTGTTTGCAACCCTTAAAGGAA
AAACCATGAAGAAAATGTTCGTGCTGTTCTGTATGCTGTTCTCCTGCGCCTTCTCCCTTGCGGCGGTAAACATCAATGCG
GCTTCGCAGCAGGAGTTGGAGGCGCTGCCGGGCATAGGCCCTGCGAAGGCGAAGGCCATTGCGGAATACCGTGCGCAAAA
CGGTGCGTTCAAGTCTGTGGACGATTTGACCAAGGTAAAGGGCATCGGCCCTGCGGTGCTGGCGAAGCTGAAGGATCAGG
CTTCTGTCGGCGCGCCCGCACCAAAAGCCCCAGCCAAACCGGTGCTGCCCGCAGCTAAAAAATAG
TTGCTTTACCCGGAAAAAATGTCGGGGATGGCGGGACGGCATCCGTACGGCGTCCGGTCGGGTTTGCGGAGGAACGGCTT
GAAACTTTGGGATATTCATTTTAGAATGACTCGTTTTATCGTCGCAAGATGCGGTTTATTGTTTGCAACCCTTAAAGGAA
AAACCATGAAGAAAATGTTCGTGCTGTTCTGTATGCTGTTCTCCTGCGCCTTCTCCCTTGCGGCGGTAAACATCAATGCG
GCTTCGCAGCAGGAGTTGGAGGCGCTGCCGGGCATAGGCCCTGCGAAGGCGAAGGCCATTGCGGAATACCGTGCGCAAAA
CGGTGCGTTCAAGTCTGTGGACGATTTGACCAAGGTAAAGGGCATCGGCCCTGCGGTGCTGGCGAAGCTGAAGGATCAGG
CTTCTGTCGGCGCGCCCGCACCAAAAGCCCCAGCCAAACCGGTGCTGCCCGCAGCTAAAAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Neisseria gonorrhoeae MS11 |
93.443 |
79.221 |
0.74 |
| comE | Neisseria gonorrhoeae MS11 |
93.443 |
79.221 |
0.74 |
| comE | Neisseria gonorrhoeae MS11 |
93.443 |
79.221 |
0.74 |
| comE | Neisseria gonorrhoeae MS11 |
93.443 |
79.221 |
0.74 |