Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | IX91_RS02265 | Genome accession | NZ_CP009354 |
| Coordinates | 454379..454999 (-) | Length | 206 a.a. |
| NCBI ID | WP_004742614.1 | Uniprot ID | F9SZR2 |
| Organism | Vibrio tubiashii ATCC 19109 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 449379..459999
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IX91_RS02255 (IX91_02310) | aceF | 450664..452562 (+) | 1899 | WP_004742612.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
| IX91_RS02260 (IX91_02315) | lpdA | 452831..454258 (+) | 1428 | WP_004742613.1 | dihydrolipoyl dehydrogenase | - |
| IX91_RS02265 (IX91_02320) | opaR | 454379..454999 (-) | 621 | WP_004742614.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| IX91_RS02270 (IX91_02325) | hpt | 455303..455833 (+) | 531 | WP_004742615.1 | hypoxanthine phosphoribosyltransferase | - |
| IX91_RS02275 (IX91_02330) | can | 455915..456583 (-) | 669 | WP_004742616.1 | carbonate dehydratase | - |
| IX91_RS02280 (IX91_02335) | - | 456998..458668 (+) | 1671 | WP_004742617.1 | SulP family inorganic anion transporter | - |
| IX91_RS02285 (IX91_02340) | - | 458837..459754 (+) | 918 | WP_004742618.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 206 a.a. Molecular weight: 23812.13 Da Isoelectric Point: 5.6218
>NTDB_id=128851 IX91_RS02265 WP_004742614.1 454379..454999(-) (opaR) [Vibrio tubiashii ATCC 19109]
MDSIAKRPRTRLSPQKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLNYVVRQFSNFLS
DNIDLDIHAKENLNNLTSAMVELVLNDCHWLKVWFEWSASTRDEVWPLFVSTNRTNQLLVQNMFVKAIERGEVCEEHEPA
ELATLFHGIFYSLFVQANRTQDEDGMKKLTESYLDMLCIYKHAKNA
MDSIAKRPRTRLSPQKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLNYVVRQFSNFLS
DNIDLDIHAKENLNNLTSAMVELVLNDCHWLKVWFEWSASTRDEVWPLFVSTNRTNQLLVQNMFVKAIERGEVCEEHEPA
ELATLFHGIFYSLFVQANRTQDEDGMKKLTESYLDMLCIYKHAKNA
Nucleotide
Download Length: 621 bp
>NTDB_id=128851 IX91_RS02265 WP_004742614.1 454379..454999(-) (opaR) [Vibrio tubiashii ATCC 19109]
ATGGACTCAATTGCTAAAAGACCGCGTACGCGTCTTTCACCGCAAAAACGAAAACAGCAACTAATGGAAATCGCACTGGA
AGTGTTCGCTCGTCGTGGCATCGGCCGCGGTGGTCATGCTGACATTGCAGAAATTGCGCAGGTTTCTGTGGCTACTGTCT
TCAACTACTTCCCGACTCGTGAAGATTTGGTTGATGACGTACTAAATTACGTTGTTCGTCAATTCTCAAACTTTCTATCA
GACAATATCGATTTAGATATTCACGCGAAAGAAAACCTAAATAACCTGACTTCAGCAATGGTTGAACTGGTACTTAACGA
CTGCCACTGGCTTAAAGTGTGGTTCGAATGGAGTGCATCAACCCGTGATGAAGTATGGCCACTGTTTGTTTCAACAAACC
GTACTAACCAACTCTTGGTTCAGAATATGTTTGTTAAGGCAATTGAACGTGGTGAGGTATGTGAAGAGCATGAGCCTGCT
GAACTAGCGACTCTGTTCCACGGTATCTTCTACTCACTGTTTGTGCAAGCAAACCGTACTCAAGATGAAGACGGCATGAA
GAAGCTAACTGAAAGCTACTTAGACATGCTGTGCATCTACAAGCACGCGAAAAACGCGTAA
ATGGACTCAATTGCTAAAAGACCGCGTACGCGTCTTTCACCGCAAAAACGAAAACAGCAACTAATGGAAATCGCACTGGA
AGTGTTCGCTCGTCGTGGCATCGGCCGCGGTGGTCATGCTGACATTGCAGAAATTGCGCAGGTTTCTGTGGCTACTGTCT
TCAACTACTTCCCGACTCGTGAAGATTTGGTTGATGACGTACTAAATTACGTTGTTCGTCAATTCTCAAACTTTCTATCA
GACAATATCGATTTAGATATTCACGCGAAAGAAAACCTAAATAACCTGACTTCAGCAATGGTTGAACTGGTACTTAACGA
CTGCCACTGGCTTAAAGTGTGGTTCGAATGGAGTGCATCAACCCGTGATGAAGTATGGCCACTGTTTGTTTCAACAAACC
GTACTAACCAACTCTTGGTTCAGAATATGTTTGTTAAGGCAATTGAACGTGGTGAGGTATGTGAAGAGCATGAGCCTGCT
GAACTAGCGACTCTGTTCCACGGTATCTTCTACTCACTGTTTGTGCAAGCAAACCGTACTCAAGATGAAGACGGCATGAA
GAAGCTAACTGAAAGCTACTTAGACATGCTGTGCATCTACAAGCACGCGAAAAACGCGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
85 |
97.087 |
0.825 |
| hapR | Vibrio cholerae C6706 |
76.5 |
97.087 |
0.743 |
| hapR | Vibrio cholerae strain A1552 |
76.5 |
97.087 |
0.743 |