Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | AS86_RS32145 | Genome accession | NZ_CP009351 |
| Coordinates | 5120609..5121652 (+) | Length | 347 a.a. |
| NCBI ID | WP_001013181.1 | Uniprot ID | - |
| Organism | Bacillus thuringiensis HD1002 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5115609..5126652
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AS86_RS32110 (AS86_5288) | - | 5115974..5116462 (+) | 489 | WP_000764263.1 | hypothetical protein | - |
| AS86_RS32115 (AS86_5289) | - | 5116497..5116808 (-) | 312 | WP_001093240.1 | hypothetical protein | - |
| AS86_RS32120 (AS86_5290) | - | 5117062..5117277 (+) | 216 | WP_001008326.1 | DUF3912 family protein | - |
| AS86_RS32125 (AS86_5291) | - | 5117365..5117757 (+) | 393 | WP_000877906.1 | hypothetical protein | - |
| AS86_RS32130 (AS86_5292) | - | 5117837..5119231 (-) | 1395 | WP_001094344.1 | L-cystine transporter | - |
| AS86_RS32135 (AS86_5293) | - | 5119339..5119581 (-) | 243 | WP_000375619.1 | DUF2626 domain-containing protein | - |
| AS86_RS32140 (AS86_5294) | - | 5119708..5120403 (-) | 696 | WP_000434108.1 | helix-turn-helix transcriptional regulator | - |
| AS86_RS32145 (AS86_5295) | comGA | 5120609..5121652 (+) | 1044 | WP_001013181.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AS86_RS32150 (AS86_5296) | comGB | 5121639..5122676 (+) | 1038 | WP_003257965.1 | competence type IV pilus assembly protein ComGB | - |
| AS86_RS32155 (AS86_5297) | comGC | 5122688..5122987 (+) | 300 | WP_001178680.1 | competence type IV pilus major pilin ComGC | - |
| AS86_RS32160 (AS86_5298) | comGD | 5122984..5123439 (+) | 456 | WP_003257968.1 | competence type IV pilus minor pilin ComGD | - |
| AS86_RS32165 (AS86_5299) | - | 5123432..5123734 (+) | 303 | WP_000829465.1 | hypothetical protein | - |
| AS86_RS32170 (AS86_5300) | comGF | 5123704..5124174 (+) | 471 | WP_000923110.1 | competence type IV pilus minor pilin ComGF | - |
| AS86_RS32175 (AS86_5301) | comGG | 5124171..5124542 (+) | 372 | WP_001214886.1 | competence type IV pilus minor pilin ComGG | - |
| AS86_RS32180 (AS86_5302) | - | 5124717..5125367 (+) | 651 | WP_000183866.1 | 2OG-Fe(II) oxygenase | - |
| AS86_RS32185 (AS86_5303) | aroK | 5125483..5125980 (+) | 498 | WP_000836635.1 | shikimate kinase AroK | - |
| AS86_RS32190 (AS86_5304) | - | 5126019..5126219 (+) | 201 | WP_000106083.1 | YqzE family protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39168.55 Da Isoelectric Point: 8.7212
>NTDB_id=128823 AS86_RS32145 WP_001013181.1 5120609..5121652(+) (comGA) [Bacillus thuringiensis HD1002]
MNGIEIFANTILKEACRVQASDLHIVPRQKDVAVQLRIGKDLMTRQCIEKEFGEKLVSHFKFLASMDIGEKRKPQNGSLY
LQIDGQEVYLRLSTLPTVYQESLVIRLHLQASVQPLSHLSLFPSTAAKLLSFLRYSQGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIITLEDPVEKRSDDVLQIQINEKAGLTYETGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAIIRFMDYGITRQEIEQSLLAVAAQRLVELKCPFCRGKCSTLCKSMRQVRQASIYELLYGYELKQALKEANGEC
VTYKHETLESSIRKGYALGFLEDDVYV
MNGIEIFANTILKEACRVQASDLHIVPRQKDVAVQLRIGKDLMTRQCIEKEFGEKLVSHFKFLASMDIGEKRKPQNGSLY
LQIDGQEVYLRLSTLPTVYQESLVIRLHLQASVQPLSHLSLFPSTAAKLLSFLRYSQGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIITLEDPVEKRSDDVLQIQINEKAGLTYETGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAIIRFMDYGITRQEIEQSLLAVAAQRLVELKCPFCRGKCSTLCKSMRQVRQASIYELLYGYELKQALKEANGEC
VTYKHETLESSIRKGYALGFLEDDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=128823 AS86_RS32145 WP_001013181.1 5120609..5121652(+) (comGA) [Bacillus thuringiensis HD1002]
ATGAATGGGATTGAAATTTTTGCTAATACAATTTTAAAAGAAGCGTGTAGGGTACAAGCGTCAGATTTACATATTGTGCC
CCGGCAGAAGGATGTAGCGGTGCAACTACGTATAGGAAAAGATTTAATGACGAGACAATGTATTGAAAAGGAGTTTGGAG
AAAAACTTGTCTCACATTTTAAATTTTTAGCATCTATGGATATAGGAGAGAAACGGAAGCCACAGAATGGTTCGTTGTAT
TTGCAAATTGATGGACAAGAAGTGTATTTACGCCTTTCAACACTTCCAACAGTATATCAAGAAAGTCTCGTTATTCGCCT
TCATTTACAAGCATCTGTTCAGCCCTTATCACATCTTTCGTTATTTCCAAGTACGGCAGCAAAACTACTCTCGTTTTTAC
GCTATTCACAGGGGCTACTCGTGTTTACTGGACCGACTGGTTCTGGGAAGACAACGACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGTCGTATCATTACACTTGAAGATCCGGTTGAAAAAAGAAGTGACGATGTATTACAAATTCA
AATAAATGAAAAAGCGGGTCTTACATATGAAACAGGATTAAAGGCTATTTTACGTCATGATCCAGATATTATTTTAGTCG
GTGAAATCCGTGATGAAGAAACAGCAAAAATAGCTATAAGAGCAAGTTTGACAGGACATTTAGTAATGACAACGCTGCAT
ACGAATGATGCGAAAGGAGCAATCATTCGTTTCATGGATTATGGTATAACGAGGCAAGAGATTGAACAGTCTTTATTGGC
TGTAGCTGCACAGCGACTTGTCGAATTGAAATGTCCGTTTTGCAGAGGGAAGTGCTCAACTTTATGTAAATCAATGAGGC
AAGTAAGGCAAGCAAGCATTTATGAGCTGCTATATGGGTATGAGTTAAAACAAGCGCTTAAAGAAGCGAATGGAGAATGT
GTTACTTACAAACATGAGACTTTAGAATCGTCAATACGAAAAGGATATGCTTTAGGGTTTTTAGAAGATGATGTTTATGT
TTAA
ATGAATGGGATTGAAATTTTTGCTAATACAATTTTAAAAGAAGCGTGTAGGGTACAAGCGTCAGATTTACATATTGTGCC
CCGGCAGAAGGATGTAGCGGTGCAACTACGTATAGGAAAAGATTTAATGACGAGACAATGTATTGAAAAGGAGTTTGGAG
AAAAACTTGTCTCACATTTTAAATTTTTAGCATCTATGGATATAGGAGAGAAACGGAAGCCACAGAATGGTTCGTTGTAT
TTGCAAATTGATGGACAAGAAGTGTATTTACGCCTTTCAACACTTCCAACAGTATATCAAGAAAGTCTCGTTATTCGCCT
TCATTTACAAGCATCTGTTCAGCCCTTATCACATCTTTCGTTATTTCCAAGTACGGCAGCAAAACTACTCTCGTTTTTAC
GCTATTCACAGGGGCTACTCGTGTTTACTGGACCGACTGGTTCTGGGAAGACAACGACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGTCGTATCATTACACTTGAAGATCCGGTTGAAAAAAGAAGTGACGATGTATTACAAATTCA
AATAAATGAAAAAGCGGGTCTTACATATGAAACAGGATTAAAGGCTATTTTACGTCATGATCCAGATATTATTTTAGTCG
GTGAAATCCGTGATGAAGAAACAGCAAAAATAGCTATAAGAGCAAGTTTGACAGGACATTTAGTAATGACAACGCTGCAT
ACGAATGATGCGAAAGGAGCAATCATTCGTTTCATGGATTATGGTATAACGAGGCAAGAGATTGAACAGTCTTTATTGGC
TGTAGCTGCACAGCGACTTGTCGAATTGAAATGTCCGTTTTGCAGAGGGAAGTGCTCAACTTTATGTAAATCAATGAGGC
AAGTAAGGCAAGCAAGCATTTATGAGCTGCTATATGGGTATGAGTTAAAACAAGCGCTTAAAGAAGCGAATGGAGAATGT
GTTACTTACAAACATGAGACTTTAGAATCGTCAATACGAAAAGGATATGCTTTAGGGTTTTTAGAAGATGATGTTTATGT
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
55.908 |
100 |
0.559 |
| pilB | Haemophilus influenzae 86-028NP |
39.752 |
92.795 |
0.369 |