Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   AA958_RS17870 Genome accession   NZ_CP011492
Coordinates   4202501..4203625 (-) Length   374 a.a.
NCBI ID   WP_047017067.1    Uniprot ID   -
Organism   Streptomyces sp. CNQ-509     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4197501..4208625
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AA958_RS17850 (AA958_17850) - 4197887..4198705 (+) 819 WP_107086228.1 hypothetical protein -
  AA958_RS17855 (AA958_17855) - 4198791..4200662 (-) 1872 WP_047017064.1 BACON domain-containing protein -
  AA958_RS17860 (AA958_17860) - 4200736..4201314 (-) 579 WP_047017065.1 phosphatase PAP2 family protein -
  AA958_RS17865 (AA958_17865) - 4201442..4202314 (+) 873 WP_047017066.1 hypothetical protein -
  AA958_RS17870 (AA958_17870) disA 4202501..4203625 (-) 1125 WP_047017067.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  AA958_RS17875 (AA958_17875) radA/sms 4203736..4205190 (-) 1455 WP_047017068.1 DNA repair protein RadA Machinery gene
  AA958_RS17880 (AA958_17880) ilvD 4205351..4207204 (+) 1854 WP_047017069.1 dihydroxy-acid dehydratase -
  AA958_RS17885 (AA958_17885) - 4207324..4207827 (+) 504 WP_047017070.1 hypothetical protein -
  AA958_RS17890 (AA958_17890) - 4207868..4208467 (-) 600 WP_047017071.1 TetR/AcrR family transcriptional regulator -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40221.89 Da        Isoelectric Point: 5.2143

>NTDB_id=128534 AA958_RS17870 WP_047017067.1 4202501..4203625(-) (disA) [Streptomyces sp. CNQ-509]
MAAGDRAGAPGRAGGSSGSDAAVRAALSAVAPGTALRDGLERVLRGNTGGLIVLGTDKIIESICTGGFVLDVEFTATRLR
ELCKLDGAVVLDQDITRIERAGVQLLPDASIPTEETGTRHRTAQRVSIQSGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERQLVVRDYVPERTGRRPHTVDRALTELDRLSHGELLELPIVARSLGYSGVPETLDAAVSPRGYRLLAKVPRIPSA
VIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=128534 AA958_RS17870 WP_047017067.1 4202501..4203625(-) (disA) [Streptomyces sp. CNQ-509]
GTGGCAGCAGGCGACCGGGCGGGCGCCCCGGGCAGAGCCGGCGGCAGTTCCGGCTCCGATGCCGCGGTGAGGGCCGCGCT
GAGCGCGGTCGCGCCCGGCACGGCGCTGCGCGACGGCCTGGAGCGGGTCCTCCGCGGCAACACCGGCGGGCTCATCGTGC
TGGGCACGGACAAGATCATCGAGTCCATCTGCACCGGCGGCTTCGTGCTGGACGTCGAGTTCACCGCCACCAGGCTGCGG
GAGCTGTGCAAGCTCGACGGCGCCGTGGTCCTCGACCAGGACATCACGCGGATCGAGCGCGCGGGCGTGCAGTTGCTGCC
CGACGCCTCGATCCCCACCGAGGAGACCGGCACCCGCCACCGCACCGCGCAGCGGGTGTCGATCCAGAGCGGCTTCCCCG
TCGTCTCCGTCAGCCAGTCGATGCGGCTCATCGCGCTGTACGTCGACGGCCAGCGGCGCGTGCTGGAGGACTCCGCCGCG
ATCCTCTCCCGGGCGAACCAGGCGCTGGCCACCCTGGAGCGCTACAAGCTCCGGCTGGACGAGGTCGCCGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTGCGGGACGTCTCCGCCGTTGCGCAGCGGCTGGAGATGGTGCGCCGGATCG
CCACCGAGATCGCGGAGTACGTGGTCGAGCTGGGCACCGACGGCCGGCTGCTCTCCCTCCAGCTCGACGAGCTGATCGCG
GGCGTCGAGCCGGAACGCCAGCTCGTGGTCAGGGACTACGTGCCGGAGCGCACCGGACGCCGCCCGCACACCGTGGACCG
CGCCCTCACCGAGCTGGACCGGCTCTCCCACGGCGAGCTGCTCGAACTGCCGATCGTGGCCCGCTCGCTGGGCTACTCGG
GGGTGCCCGAGACCCTCGACGCCGCGGTCTCGCCGCGGGGTTACCGGCTGCTGGCCAAGGTGCCGCGCATCCCCAGCGCC
GTCATCGACCGGCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTCCTCGCCGCCAGCGTGGACGACCTGCAGACGGTCGA
CGGCGTGGGCGAGGCGCGGGCCCGCTCGGTGCGCGAGGGGCTGTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.402

93.048

0.422


Multiple sequence alignment