Detailed information NTG0128385

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: AW22_RS26410
• Genome accession: NZ_CP009300
• Coordinates: 4858133..4859482 (+)
• Length: 449 a.a.
• NCBI ID: WP_042513388.1
• Uniprot ID: -
• Organism: Bacillus cereus D17
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4853133..4864482

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AW22_RS26385 (AW22_5029)	-	4854236..4854871 (-)	636	WP_000926685.1	YigZ family protein	-
AW22_RS26390 (AW22_5030)	-	4855111..4855953 (+)	843	WP_000844766.1	DegV family protein	-
AW22_RS26400 (AW22_5031)	-	4856127..4856441 (+)	315	WP_000400857.1	winged helix-turn-helix transcriptional regulator	-
AW22_RS26405 (AW22_5032)	-	4856695..4858005 (+)	1311	WP_042513387.1	NlpC/P60 family protein	-
AW22_RS26410 (AW22_5033)	comFA	4858133..4859482 (+)	1350	WP_042513388.1	ATP-dependent helicase ComFA	Machinery gene
AW22_RS26415 (AW22_5034)	comFC	4859482..4860186 (+)	705	WP_041184339.1	comF operon protein ComFC	-
AW22_RS26420 (AW22_5035)	cspC	4860313..4860510 (+)	198	WP_001990088.1	cold shock protein CspC	-
AW22_RS26425 (AW22_5036)	hpf	4860834..4861376 (+)	543	WP_000671189.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
AW22_RS26430 (AW22_5037)	secA	4861653..4864160 (+)	2508	WP_000579383.1	preprotein translocase subunit SecA	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51377.10 Da
• Isoelectric Point: 9.7782

>NTDB_id=128385 AW22_RS26410 WP_042513388.1 4858133..4859482(+) (comFA) [Bacillus cereus D17]
MVAGKQLLLEELSSDLRRELSDSKKKGEIICVQGVIKKAFKYICQRCGNIEQRLFASFLCKRCNKVCTYCRKCITMGRVS
ECAVLVRGIHERKGERELHSLQWKGSLSLGQELAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGIEEALQKGERVCIAT
PRTDVVLELVPRLQEVFPSINVAALYGGSVDREKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVQQAM
KEKAARIYLTATPDEKWKRNFRRGKQKGIIVSGRYHRHPLPVPLFSWCGNWKKSLHHKKIPRVLLQWLKMYVNKKYPIFL
FVPHVRYIEEMSLLLKGLDHRIDGVHAEDPMRKEKVAAFRKGDIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEEPYGEVFYFHYGKTESMVRAKRHIQSMNKSAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=128385 AW22_RS26410 WP_042513388.1 4858133..4859482(+) (comFA) [Bacillus cereus D17]
ATGGTTGCTGGAAAGCAGTTACTATTAGAAGAACTCTCTTCAGATTTACGGAGAGAATTAAGTGATTCGAAAAAGAAGGG
AGAGATCATATGTGTACAAGGTGTAATAAAGAAGGCTTTTAAATATATATGTCAGCGCTGCGGGAATATAGAGCAGCGGC
TATTTGCATCATTTTTATGTAAAAGGTGCAATAAAGTATGTACGTATTGCCGCAAGTGTATAACGATGGGGAGAGTTAGT
GAATGTGCTGTACTTGTTCGTGGGATTCACGAAAGAAAAGGAGAAAGGGAATTACATTCGTTACAGTGGAAAGGGAGTTT
GTCTCTTGGTCAGGAGTTGGCGGCGCAAGGTGTTATAGAAGCTATTAAGCAGAAAGAATCTTTTTTTATTTGGGCTGTGT
GCGGGGCCGGAAAAACAGAAATGTTATTTTACGGTATAGAAGAGGCACTTCAAAAAGGAGAAAGAGTTTGTATCGCAACA
CCAAGGACGGACGTTGTACTGGAATTAGTACCGAGATTACAAGAAGTGTTTCCAAGTATAAATGTAGCTGCTTTATACGG
AGGGAGTGTAGATCGTGAAAAAGATGCAGCGTTAGTCGTTGCAACGACTCACCAACTGTTACGTTACTATAGAGCATTTC
ATGTGATGATTGTAGATGAGATTGATGCCTTCCCGTATCATGCGGATCAAATGTTACAGTATGCAGTGCAGCAAGCGATG
AAAGAGAAAGCAGCGCGTATTTATTTAACTGCAACCCCTGATGAAAAGTGGAAGCGCAATTTCAGAAGAGGGAAACAAAA
AGGTATCATTGTCTCTGGACGATACCATCGTCATCCGTTACCAGTTCCTCTATTTAGTTGGTGCGGAAATTGGAAGAAAA
GCCTCCATCATAAAAAAATTCCTCGTGTGTTACTACAATGGTTAAAAATGTACGTAAACAAAAAATACCCTATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGAAATGAGCCTGTTATTGAAAGGGTTGGATCATAGAATCGATGGCGTACATGC
AGAAGATCCGATGAGAAAGGAAAAAGTGGCAGCGTTTAGAAAGGGAGACATTCCGTTATTAGTTACAACGACAATTTTAG
AAAGAGGGGTAACTGTGAAGAACTTACAAGTGGCTGTGTTAGGGGCTGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCAGGCCGAGCAGGTCGTAGTTTTGAAGAACCGTATGGTGAGGTTTTTTATTTTCACTACGGCAAGACAGAGTC
GATGGTACGTGCGAAAAGACATATTCAAAGTATGAACAAAAGTGCGAAAGAACAAGGATTAATTGATTAA

Domains

Predicted by InterproScan.

• Type III restriction enzyme, res subunit (ResIII) (108-254)

• Helicase conserved C-terminal domain (Helicase_C) (312-408)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	51.843	96.659	0.501
comFA	Latilactobacillus sakei subsp. sakei 23K	40.75	89.087	0.363